Phocoena sinus (vaquita): 116742580 Help Entry 116742580         CDS       T07759                                  Symbol COL14A1 Name (RefSeq) collagen alpha-1(XIV) chain   KO K08133   collagen type XIV alpha Organism psiu  Phocoena sinus (vaquita) Pathway psiu04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:psiu00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     116742580 (COL14A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:psiu00535]     116742580 (COL14A1) Proteoglycans [BR:psiu00535]  Extracellular matrix (ECM) proteoglycans   Others    116742580 (COL14A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA fn3 Collagen VWA_2 Pur_ac_phosph_N VWA_3 fn3_2 Motif Other DBs NCBI-GeneID:  116742580 NCBI-ProteinID:  XP_032466212 Ensembl:  ENSPSNG00000009521 LinkDB All DBs Position 17:60631792..60877213 Genome browser AA seq 1796 aa AA seqDB search MKIFQCKMHHWLFPAFLAITYFCTNVQGQVAPPTRLRYNVLSHDSIQISWKAPRGKFGGY KLLVTPAAGGKTNQLNLQNTATKAIIQGLMPDQNYTVQIIAYNKDKESKPAQGQFRIKDL EKRKEPKPRVKVLDKGNENKPSVPGEVKFFCQTPAVADIIILVDGSWSIGRFNFRLVRSF LENLVTAFDVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIEAVRNLPYKGGNTLTGLA LNYVFENSFKPEAGARTGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADEN ELQEIASEPDNTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDREIKASALATTGPPTELI TSEVTARSFMVNWTHAPGKVEKYRVVYYPARGGKPEEVVVDGSLSSTVLKNLMSLTEYQI AVFAIYAHTASEGLRGTETTLSLPIVSDLELYDVTENSLRARWNPVAGASGYLILYAPLT EGLAGDEKEMKIGETHTDIELSALLPNTEYTVTVYAMFGEEASDPVTGQETTLPLSPPRN LRISSVGSNSARLAWDPTSRKISGYRIVYNNADGTEINEVEVDPVTTFPLKGLTPVTEYT VAIFSIYDEGQSEPLTGIFTTEEVPAQQYLEIDEVTTESFRVTWHPLSVDEGQHKLMWIP VYGGKTEEVVLKEDQDSYVIEGLEPGTEYEVSLLAVLDGGSETEVVTAVGTTLDSVWTEP PTTEAPTRPVTSVFRTGVRNLVVDDETTSSLRVKWDISDSSVQQFRVTYLTAQGDPAEEV VGTVMVPGSQNNLLLKNLLSSTEYKVTVTPIYDDGEGVSVSAPGKTLPPSGPQNLQVSEE WYNRLRITWDPPSSPVKGYRIVYKPVSVAGPTLETFVGANINTILITNLLSGMDYNVKIF ASQASGFSDALTGVVKTLFLGVTNLQADQIQTTSLCARWQVQRHATAYRVVIESRQDTQK QESTLGGGTNRHCFYGLQPDSEYKISVYTKLHEIEGPSVSITEKTQSLPTQPPTFPPTIP PAKEVCKAAKADLVFMVDGSWSIGDENFNKIINFLYSTVGALDKIGADGTQVAMVQFTDD PRTEFKLNSYKTKETVLDAIKHISYKGGNTKTGKAIKHVRDTLFTAESGTRRGIPKVIVV ITDGRSQDDVSKISREMQSDGYSIFAVGVADADYSELVSIGSKPSARHVFFVDDFDAFKK IEDELITFVCETASATCPLVHKDDIDLAGFKMMEMFGLVEKEFSSVERVSMEPGTFNVYP CYQLHKDALVSQPTKYLHPEGLPSDYTISFLFRILPDTPEEPFALWEILNKNSDPLVGVI LDNGGKTLTYFNHDYSGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTLAKVVIDCKQVGE KAVNASSNITLDGVEVLGRTVRSRGPNGNSAPFQLQMFDIICSTSWASKDKCCELPGLRD EETCPELPHSCSCSEINKGALGPAGPPGGPGLRGPKGQQGDLGPKGPDGPRGETGPPGPQ GPPGPQGPSGLSIQGMPGMPGEKGEKGATGLPGPQGIPGGVGSPGRDGSPGQRGFPGKDG SSGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRAVA HQVCEQLIQSHMARYTAILNQIPSQSTSIRTIQGPPGEPGRPGSPGTPGEQGPPGAPGFP GNAGVPGTPGERGLTGVKGDKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGP PGHLGVPGPQGPSGQPGYCDPSSCSAYSVGVPHPDEPEFTPVQDELEAMELWGSGI NT seq 5391 nt NT seq  +upstreamnt  +downstreamnt atgaagatttttcagtgcaagatgcatcattggctgtttccagcttttttggcaattact tatttttgcaccaatgtccagggtcaagtggctccacccacaaggttaagatataatgta ttatctcatgatagtatccagatttcatggaaggctccaagagggaaatttggtggatac aaacttcttgtgactccagctgcaggtggaaaaaccaatcaattgaatctccagaacact gcaactaaagcgattattcaaggtcttatgccagaccagaattacacagttcaaattatt gcatacaataaagacaaagaaagcaagccagcccaaggtcaattcagaattaaagattta gaaaaaagaaaggaaccaaaacccagagtcaaggttttggacaaaggaaatgagaataaa ccatctgtaccaggagaagtgaaatttttctgtcaaactccagctgttgctgatattata attctggttgatggctcatggagtattggaagattcaacttcagactggttcggtctttt ttggaaaacctggttacagcattcgacgtgggctccgagaagacacgaattggtcttgca cagtatagcggcgaccccagaatagaatggcacttgaatgcttttaacacaaaagatgag gtgatcgaagctgtccgaaatctaccatacaagggaggaaatacactaacaggtcttgct ttgaactacgtctttgaaaacagctttaaaccagaagcgggagcgaggactggagtgtcc aaaattggcattttaatcacagatggaaaatcccaagatgatatcattccaccatccaga aaccttcgtgaatctggtgtagaactgtttgccataggggtgaaaaacgcagatgagaat gaattgcaggagatcgcctctgaaccagacaacactcatgtgtacaatgtcgccgaattt gacctgatgcatacagttgtggagagtctgacgaggactgtctgctccagggtggaagaa caggacagggagatcaaagcctcagcccttgccaccactgggccacctacagaactgatt acttctgaagtcactgccaggagctttatggtaaactggactcatgccccaggaaaagtg gaaaaatacagagtcgtgtattatcctgccaggggtggaaaaccagaagaggtggtggtg gatggaagcctatcttccacagtattgaaaaacttgatgtctttaactgaatatcagata gcagtctttgcaatatacgctcacactgctagcgaaggccttcggggaactgaaaccaca ctttctttacctatagtttctgaccttgaactgtacgatgtgactgagaacagtctgagg gcgagatggaacccagtggctggagcgtcagggtacctgatcctttacgctcctctcacg gaaggcctggctggggatgaaaaagagatgaaaattggagagacccacacggatattgag ctgagtgcgttgttgcccaatacggaatacacagtcacagtttacgctatgtttggagaa gaggccagcgaccctgttacaggacaagaaacaacattgcccttaagtccacccagaaac ctgagaatctccagtgtgggctctaacagtgctcggttagcctgggacccaacttcaaga aagatcagtggttatcggattgtatataacaacgccgatgggactgaaatcaatgaggtt gaagttgatcctgttactacgttccctctgaagggcttgacacccgtcaccgagtatact gttgccattttctccatctatgatgaaggacagtcggagcctctgactggaatttttacc acagaggaagttcccgcccagcaatacttggaaattgatgaggtgacaacagagagtttt agagtgacctggcatcccctctcagttgatgaagggcaacacaagttgatgtggattcca gtctacggtgggaagactgaagaagttgtcctaaaagaagaccaagactcatatgttatt gaaggcctggaacctggcactgaatatgaagtttccctgttggctgtactggatggtgga agcgagactgaggtggtgactgccgttgggaccacacttgacagtgtttggacagaacca cctacgaccgaagcacctaccaggcctgtgacatcagttttccgcacaggagtcagaaac ctggttgtagatgatgaaaccacttctagcctgcgggtgaaatgggacatttcagacagc agtgtgcagcagttcagggtgacctacctgactgctcaaggggaccctgccgaagaagtg gtaggaacggttatggtgcctggaagccagaataatctccttctgaagaatctgctttcc agtactgaatacaaagtcacagtgactcccatttacgatgatggagaaggggtcagtgtc tctgcccctggaaaaaccttgccaccttctggtccccaaaacctacaggtttccgaagaa tggtataacagattgcgcattacatgggatcccccatcttcccctgtaaagggctatagg attgtctataaacctgtcagtgttgctggcccaacgctggaaacattcgtaggggctaac attaacaccatccttattacaaacctcctcagtggaatggactacaacgtgaaaatattt gcttcccaggcctcaggtttcagcgacgctctaacaggcgtggtgaaaacactgtttttg ggtgtgaccaatcttcaggcagaccagatccaaacaaccagcttgtgtgctcgctggcag gtgcagcgtcatgccactgcctacagggtagttatcgaatcccgccaggatacacaaaag caagaatccactctgggtggagggacaaacagacattgcttctatggacttcagccagat tcagaatataaaatcagtgtttacacaaagctccacgagattgagggacccagtgtgagc ataacggaaaaaacacaatcacttcctactcagccacctacttttcctccaaccattcca ccagcaaaagaagtatgtaaagctgccaaagccgacctggtgtttatggtggatggatcc tggagtattggtgatgaaaatttcaataagatcattaacttcctgtatagcactgttgga gctctggacaagataggtgcagatggaactcaagttgcaatggtccagttcactgatgac cccaggacagaatttaaacttaactcttacaaaaccaaagagactgttcttgatgcaatt aaacatatctcgtacaaaggaggaaatacaaaaacaggaaaagcaattaagcatgtccga gataccttgtttactgcagagtcaggaaccagaagaggcatcccgaaggtcatcgtggtt ataactgatggaagatcacaagatgatgtgagcaaaatctccagggagatgcaatcagat ggctacagcatttttgcagtcggcgtggctgatgcagattactcagagttggttagcatt ggcagtaagcccagcgcccggcatgtcttctttgtggatgactttgacgcctttaagaaa attgaagatgagttgattacttttgtctgtgaaactgcgtcagcaacctgcccactggtg cataaggatgacattgatcttgcaggatttaagatgatggaaatgtttggtttggttgaa aaggaattttcatcggtggaacgggtttctatggagcctggtaccttcaatgtgtatcct tgttatcaacttcataaagatgccctggtttcccagccaaccaaatatttacatccagaa ggattgccctctgactatacaatcagttttctattccggattcttcctgatactccagag gagccatttgctctttgggagattttaaataaaaattctgacccattggttggagtcatt ttagataatggtgggaaaaccctaacatatttcaaccatgactacagtggggattttcaa actgttacttttgaaggacctgaaattaggaaaattttctatggaagctttcacaagcta catgttgttatcagcaagactttggccaaagtggttattgactgcaagcaagtgggtgag aaggcagtaaatgcatcgtctaatatcacattagatggcgtcgaagtcctagggagaacg gttagatcaagaggaccaaatggaaactctgcaccattccagttacagatgtttgatatt atttgttccacatcatgggccagtaaagacaaatgctgtgaacttcctggcctgagggat gaagagacctgcccagagcttccacattcctgctcctgttctgaaatcaataaaggggct ctgggaccagcaggcccaccgggtggtccaggactccgaggaccaaagggccaacaaggt gacctgggcccaaagggaccagatggccctcggggtgaaacaggccctccgggacctcag ggtcctcctggaccccaaggaccaagtggtctgtccattcaaggaatgcctggaatgcca ggcgaaaaaggagagaaaggagcgactggacttcctggcccacagggcatcccaggaggt gttggttcaccaggacgtgatggctcaccaggccaaaggggctttcctggaaaggatgga tcctctggccctccgggaccaccagggccaattggcattcccggagcccctggagtccca ggaatcacaggaagcatgggaccccaaggcgccctcggaccacctggtgtccctggagca aagggagaaagaggagaaagaggtgacctacagtctcaagccatggtgagagcagtggca catcaggtgtgcgaacagctcatccaaagtcatatggccaggtacacagccatcctcaac cagatccccagccagtcaacatcaattcggaccatccaagggcctcctggagagcctggg agaccaggctcacctggaacccctggtgaacaaggacccccaggtgccccaggcttccca ggaaacgcgggtgtgccagggaccccaggagaacgaggtttaactggtgtgaagggagat aaaggaaatccaggcattggaactcaaggtccaagaggcccccctgggccagcaggacct tccggggaaagtcggccaggaagccctggaccccctggctctcctggaccaaggggtcca ccaggtcacttgggggtgcctggaccacaaggtccttctggccagcctggatactgcgac ccctcttcatgttctgcctacagcgtaggagttccccatcctgatgagccagaattcacc cctgtccaagatgagctggaagccatggagctgtggggctctgggatctga

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