Phocoena sinus (vaquita): 116742655
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Entry
116742655 CDS
T07759
Symbol
LRRC8D
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116742655 (LRRC8D)
Ion channels [BR:
psiu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
116742655 (LRRC8D)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
116742655
NCBI-ProteinID:
XP_032466347
Ensembl:
ENSPSNG00000013380
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Position
1:79955942..80071750
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AA seq
855 aa
AA seq
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MFTLAEVASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVVCLPVLPS
PVNSKAHTPPGSADVTTNIPKVESATDQDQDGRMTNEISFGASAVTPDIPLRATYPHTDS
TVPNQEAKKDPAGRKTNLDFQQYVFINQMCYHLALPWYSKYFPYLALIHTIILMVSSNFW
FKYPKTCSKVEHFVSILGKCFESPWTTKALSETACEDSEENKQRITGAQTLPKHVSTSSD
EGSPSASTPMISKTGFKFSAEKPVIEVPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDL
IYKLYVVQTVIKTAKFIFILCYTANFVNAISFEHVCKPKVEHLTGYEVFECTHNMAYMLK
KLLISYISIICVYGFICLYTLFWLFRIPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMV
DQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHVSRNAQDKQELHLFMLSGVP
DAVFDLTDLDVLKLELIPEAKIPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLRCLH
VKFTDVAEIPAWVYLLKNLRELYLIGNLNSENNKMIGLESLRELRHLKILHVKSNLTKVP
SNITDVAPHLTRLVVHNDGTKLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNLQEL
DLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVTIPPSITHVKNLESLYFSNNKLESLPV
AVFSLQKLRCLDVSYNNISMIPIEIGLLQNLQHLHITGNKVDVLPKQLFKCIKLRTLNLG
QNCITSLPEKIGQLSQLTQLELKGNCLDRLPAQLGQCRLLKKSGLVVEDHLFDTLPLEVK
EALNQDINIPFANGI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccttgcggaagttgcttcacttaatgacattcaaccaacttaccgaatcctg
aaaccatggtgggacgtgtttatggattacctggctgtcgttatgttgatggtagccatc
tttgcaggaaccatgcaacttaccaaagatcaggtggtctgcttgccagtattgccatct
cctgtaaattcaaaggcacacacaccaccaggaagtgccgacgttaccaccaacatcccg
aaggtggagtcagccacagaccaagaccaagatgggcggatgacaaatgagatttccttt
ggcgcatctgctgtgacacctgacatacctctcagagccacatatcctcacacagattcc
acggttccaaatcaggaggcaaagaaagacccagcaggccgaaaaacaaacttggatttt
cagcaatatgtatttattaatcagatgtgttaccacctggcccttccgtggtattctaag
tactttccgtaccttgctcttatacatactattattctcatggtcagtagcaacttttgg
ttcaaatatcccaaaacatgctcaaaagtagaacatttcgtttcaatattaggaaagtgc
tttgaatctccttggactactaaagcgttgtctgagacagcatgcgaagactcggaggaa
aacaagcagagaataacaggtgcccagactctaccaaagcacgtatctaccagcagtgat
gaagggagccccagcgccagcaccccaatgatcagcaaaactggcttcaaattttcagct
gaaaagcccgtgattgaagtccccagcatgaccatcctggacaaaaaggacggggaacag
gccaaagccctgtttgagaaagtgaggaagttccgtgctcacgtggaagacagtgacttg
atctataaactctacgtggtccaaacagttatcaaaacagccaagttcatctttatcctc
tgctacactgcaaacttcgtcaatgcgatcagctttgaacacgtctgcaagcccaaagtt
gagcacctgacgggttacgaggtgtttgagtgcacccacaacatggcatacatgctgaaa
aaactgctcatcagttacatatccattatttgcgtttatggttttatctgcctctacact
ctcttctggttattcaggatacctttgaaggaatattcttttgaaaaagtcagagaagag
agcagtttcagtgacattccagatgtcaaaaatgattttgcgttccttctacacatggta
gaccagtatgaccagctgtattccaagcgtttcggggtgttcttgtcggaagtcagtgaa
aataaactgagggaaatcagtttgaaccacgagtggacatttgaaaaactgaggcagcac
gtgtcacgcaacgcccaggacaagcaggagctccatctgtttatgctctcaggtgtgccc
gatgctgtcttcgacctcacagacctggatgtgctaaaactcgagctgatcccagaagct
aaaattcctgctaagatttctcagatgactaacctccaagagcttcacctctgccactgc
cctgcaaaagtggaacagactgcttttagcttcctccgtgatcacttgagatgccttcac
gtgaagttcaccgacgtggcagaaattcccgcctgggtgtatctgctcaaaaaccttcgc
gagctgtacttgataggcaacttgaactctgaaaacaataagatgataggacttgaatcc
ctccgagagttgcggcaccttaagattctccacgtgaagagcaatctgaccaaagtcccc
tccaacattacagatgtggctccgcatctcacaaggttagtcgttcataatgacggcact
aaactcctggtactgaacagccttaagaagatgatgaatgtcgccgagctcgagctccag
aactgtgagctagagagaattccacatgctattttcagcctctctaacttgcaggaacta
gatttaaagtcaaataacatacgcacaattgaagaaatcatcagtttccagcatttaaag
cgactgacttgtttaaaactgtggcataataaaatcgttaccattccaccctccatcacc
cacgtcaaaaacttggagtcactttatttctctaacaacaagctcgaatccctacctgtg
gcagtgtttagtttacagaaactcagatgcttagatgtaagctacaacaacatttccatg
atcccaatagaaataggattacttcagaacctgcagcatttgcatatcacggggaacaaa
gtggacgttctgccaaaacagttgtttaaatgcattaagttgaggactttgaatctgggg
cagaactgcatcacttccctcccagagaagatcggtcagctctcccagctcacccagctg
gagctgaaagggaactgcttggaccgcctgccagcccagctgggccagtgtcgcctgctc
aagaagagcgggcttgttgtggaagatcacctttttgacaccctgccactcgaagtcaaa
gaagcattgaatcaagacataaatattccctttgcaaatgggatttaa
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