Phocoena sinus (vaquita): 116746316
Help
Entry
116746316 CDS
T07759
Symbol
GP1BA
Name
(RefSeq) platelet glycoprotein Ib alpha chain
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04512
ECM-receptor interaction
psiu04611
Platelet activation
psiu04613
Neutrophil extracellular trap formation
psiu04640
Hematopoietic cell lineage
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116746316 (GP1BA)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
116746316 (GP1BA)
04611 Platelet activation
116746316 (GP1BA)
04613 Neutrophil extracellular trap formation
116746316 (GP1BA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116746316 (GP1BA)
CD molecules [BR:
psiu04090
]
Proteins
116746316 (GP1BA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Cornifin
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
116746316
NCBI-ProteinID:
XP_032473611
Ensembl:
ENSPSNG00000019515
LinkDB
All DBs
Position
20:9641736..9646011
Genome browser
AA seq
608 aa
AA seq
DB search
MPLFLLLLLLPSPSHSHPICGISEVASEVEMNCENKGLKALPSDLQAETNILRLGGNPLG
TFSMASMVNLTHLTQLHLEKTQLTSLQTDATLPRLETLIISHNTLRSLPLLGRALPALYT
LDVSFNELASLSPDALDGLSHLHELYLRGNKLKTLPPGLLQPTPKLKKLNLAENGLSELP
PGFLDGLEELDTLYLQRNLLPTIPKGFFGDLLLPFAFFHDNTWFCDCGILYFSHWLQDNA
NNVYIWKEGVDAKAMTPNVTSVGCVNLPNTFVYTYSGEGCHTPGDRDSIDYDVYEEDDKV
PTTRAAGSFSTHTSAHTTHWGLLYSLPTAPLGPQVSSLPPTKEQTTFRISTGPITFSKTL
KPTPEPTSLSTPEPTGPSTPEPRAPRTPEPTGPSTPEPTSPSTPEPTGPSTPEPRAQSTP
QPRAPSTPEPTSETSEPTVSLTSTEPTSLPTILESTTATISEFVNLLKAQGVAQWNMESS
RNDPFLNSDFCCLFLGFYILGLLWLLFASVVLILLLFWVQHVKPQALATVTHTSHLELQR
GRQVTVARAWLLFLQGSLPTFRSSLFLWVRPNGRVGPLLAGRRPSALSMGRGQDLLGTVA
VRYSGHSL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcctcttgctgctcctgctgccaagcccttcgcactcccaccccatctgt
ggcatcagcgaagtggccagcgaggtggaaatgaactgtgaaaataaggggctgaaggcg
ctgccttcagatctgcaagcagaaaccaacatcctccgcctgggtgggaaccccctgggc
accttctccatggcgtccatggtgaatctgactcacctcactcagctgcacctggagaag
acccagctgaccagcctgcagactgacgcgacgctgccccggctggagaccctgattata
tcccacaatacgctgagaagcctgcccttgttgggacgggcgctgccagcactctatacc
ctggacgtctccttcaatgagctggcctcattgtctcctgatgccctggatggcctgagc
cacctccatgagctctacttgcgtggcaacaagctgaagactctgcccccggggctcctg
cagcccacgcccaagctgaagaagctcaacctggctgaaaacgggttgagtgagctgccc
cctgggttcctggatgggttggaggaacttgacaccctctacctccagcggaacttgctg
cccacgataccaaagggcttctttggggacctcctcctgccttttgcttttttccacgac
aacacctggttctgtgactgcgggatcctctatttcagccactggctgcaggacaatgcc
aacaatgtgtacatatggaaggagggtgtggacgccaaggccatgacccccaacgtgacg
agcgtggggtgtgtcaatttgcccaacacgtttgtctacacctactcaggcgagggctgc
cacacccctggcgacagggacagcatagactacgatgtctatgaagaggatgacaaggtg
cctaccacaagggctgcgggcagcttctctacccacaccagtgcccacaccacccactgg
ggcctgctttactcactgccgactgctccgctaggcccccaagtgtcctccttgcctcca
actaaggaacagaccacgttccgaatttctacaggacccatcacattctccaaaactcta
aaacccaccccagagcccacaagcctgagcaccccagagcccacaggcccgagcacccca
gagcccagagccccgagaaccccagagcccacaggcccgagcaccccagagcccacaagc
ccgagcaccccagagcccacaggcccgagcaccccagagcccagggcccagagcacccca
cagcccagagccccgagcaccccagagcccacaagcgagacctcagaacccaccgtatcc
ttaacctccactgaacctacttcacttcccactatcttagaatccaccacagccaccatc
tctgaatttgtcaacctcctgaaggcccagggcgtggctcagtggaatatggagagttcc
agaaacgacccttttctcaactctgacttttgctgcctcttcctgggcttctatatcttg
ggtctcctctggctcctgtttgcctctgtggtcctcatcctgctgctgttctgggtccag
cacgtgaaaccacaggccctggccacagtcacacacacctcgcatctagagctgcagagg
ggaaggcaagtgacagtggcccgggcctggctgcttttcctccaaggctcgctccccact
ttccgctctagcctcttcctgtgggtgcggcctaatggccgtgtggggcctctgctggca
ggacggcggccctcagccctgagcatgggtcgtggtcaggacctgctggggacagtggct
gttaggtactctggccacagcctctga
DBGET
integrated database retrieval system
