KEGG   Phocoena sinus (vaquita): 116746395
Entry
116746395         CDS       T07759                                 
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
  KO
K18435  transcription factor SOX9 (SOX group E)
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04024  cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    116746395 (SOX9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psiu03000]
    116746395 (SOX9)
Transcription factors [BR:psiu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    116746395 (SOX9)
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2
Other DBs
NCBI-GeneID: 116746395
NCBI-ProteinID: XP_032473769
Ensembl: ENSPSNG00000021947
LinkDB
Position
20:complement(54248489..54253962)
AA seq 509 aa
MNLLDPFMKMTDEQEKGLSGAPSPSMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPP
NGHPGVPATHGQVTYTGSYGISSTAATPAGASHVWMSKQQAPPPPPQAPPPAPPAPPQPP
AQAPPQPSAQAPPQPPAQAHTLTTLSSEPGQAPRTHIKTEQLSPSHYSEQQQRSPQQIAY
SPFSLPHYSPSYPPVTRSQYDYTDHQNSGSYYSHAAGQGSGLYSTFSYMNPAQRPMYTPI
ADTSGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtccggc
gcccccagcccctccatgtccgaggactcggcgggctcgccctgcccttcgggctccggc
tctgacaccgagaacacgcggccccaggagaacacgttccccaagggcgagccggacctg
aagaaggagagcgaagaggacaagttccccgtgtgcatccgcgaggccgtcagccaggtg
ctcaagggctacgactggacgctggtacccatgccggtgcgcgtcaacggctcgagcaag
aacaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggcggcgcgc
aggaagctcgccgaccagtacccacacctgcacaacgccgagctcagcaagacgctgggc
aaactctggagacttctgaatgagagcgagaagcggcccttcgtggaggaggcggagcgg
ctgcgcgtgcagcacaagaaggaccacccggattacaagtaccagccgcggcggaggaag
tcggtgaagaacggccaggcggaggccgaggaggccacggagcagacgcacatctcccct
aacgccatcttcaaggcgctgcaggccgactcgccgcactcctcctccggcatgagcgag
gtccattcccccggagagcactccgggcaatcgcagggtccaccgacgccaccgaccacc
cccaaaaccgacgtgcagccgggcaaggctgacctgaagcgagaggggcgcccgctgcca
gaggggggcagacagccccccatcgacttccgcgacgtggacatcggcgagctgagcagc
gacgtcatctccaacatcgagaccttcgacgtgaacgagttcgaccagtacctgccgccc
aatggccacccgggggtgccggccacgcacggccaggtcacctacacgggcagctacggc
atcagcagcacagccgccaccccggcgggcgctagccacgtgtggatgtccaagcagcag
gcgccgccgccgcccccgcaggcgcccccgccggccccgccggcgcccccgcagccgccc
gcgcaggcgcccccccagccgtccgcgcaggcgcccccgcagccgccggcgcaggcgcac
acgctgaccacgctgagcagcgagccgggccaggccccgcgaacgcacatcaagacggag
cagctgagtcccagccactacagcgagcagcagcagcgctcgccgcagcagatcgcctac
agccccttcagcctcccgcactacagcccgtcctacccgcccgtcacccgctcgcagtac
gactacactgaccaccagaactccggctcctactacagccatgcggcgggccagggctcc
ggcctctactccaccttcagctacatgaacccggcgcagcggcccatgtacacccccatc
gccgacacctccggggtcccttccatcccgcagacccacagcccccagcactgggaacag
cccgtctacacacagctcaccagaccttga

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