Phocoena sinus (vaquita): 116748129
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Entry
116748129 CDS
T07759
Symbol
KIAA1217
Name
(RefSeq) sickle tail protein homolog isoform X1
Organism
psiu
Phocoena sinus (vaquita)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIP3
Motif
Other DBs
NCBI-GeneID:
116748129
NCBI-ProteinID:
XP_032476885
Ensembl:
ENSPSNG00000006898
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All DBs
Position
2:complement(11312527..11805834)
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AA seq
1935 aa
AA seq
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MEENESQKCEPCLPYSADSRQMQEQGKSNSQVASLEDAECRRTKERLSNGNSRVSASKSS
RNIPRRHTLGGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHATAIMGHQERLRDQTR
SPKLSHSPQPPNLGDPVEHLSEASGDSLEAMSEGETPSPFSRGSRTRASLPVVRSTNQTK
ERSLGVLYLQYGDETKQLRMPNEITSADTIRALFVSAFPQQLTMKMLESPSVAIYIKDES
RNVYYELSDVRNIQDRSLLKVYNKDPAHAFNHTPKTVNGDVRMQREIVYARGDGPGASRP
GPTTLLPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRPMVVPGNATIPRDRLSSLPVSRSI
SPSPSAILERRDVKPDEDMSSKSLAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDLPDH
IIGYHRAAVRSASAYCSPSLQAEMHMEQSLYRQKSRKYPESLLPTLGSKTPPASPHRVSD
LRMVEMHGLHNAHGPSHTMQPDRVSPSRQAFKKEPGTLVYIEKPRTTPGLAGMVDLGPPL
VEKQVFAYSTATIPKDRETRERMQAMEKQIASLTGLVQSALFKGPLTSNSKDASSEKMMK
TAANKNHTDGAGTPQVSGGKPLGALESSGPRSQLPPAGTSAAHMSLLDMKRSVAELRLQL
QQMRQLQLQNQELLRALMRKAEQEINSKVIETLKRLEDPVQRQRVLVEQERQKYLHEEEK
VVRKLCDLEDFVEDLKKDSALASRVVTLKDVEDGAFLLHQVGEAVASLKGEFPTLQNKMR
AILRIEVEAVRFLKEEPHRLDSLLQRVRGMTDALTTLRRHVTDGLLKGTDAAPAAQYVVM
EKATAAEVLKAQEEAPRASGQPLPGAGVPGDVKSEVVPLTVHHAQSSPVVIQPSQLSSAL
LNPAQHLPGGPGPHPASPPAVTQEVTSALQSPQMPGNGSSMQSLFMDEIHSVSAKNRAVS
IEKAERKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPASGPQPKGDAPVDKL
EPSEDSPNSEQDLDKLGAKSPPRPPPPPRRSYLPGSGLTTTRSGDVVYTSRKENATTKAS
SEDAGPSLQARATKCPAEEPASAWAPSPPPVTTSSFKDEEEEEGDKIMAELQAFQKCSFM
DVNSNSHAEQSRADSHLKDTRPGATALPKEKKNLEFFHEDVRKSDVEYENGPQMESWKVT
AGASIPSDHPKWERGMENSISDAARTSEYKTDILMKESSISTKSLLRDGRNYSQKNVSRV
NSSFSGVSSLEDEINKGPKISGLPYPVCDTENQKMNYGKTKGVIQQGQENTDKCHLPSPT
RSTESTIRDVKTQDREVPLTEFGQVVLRPKGARPANVTPDEDGESTAGSPTEESATTDSI
AFMITKTAVQVLSSGEVRDIVSKQGQDVQTVNIDAKKETASQQEGTDSEEPVVCLDKKPV
IIIFDEPMDIRSAYKRLSTIFEECDEELERMMTEEKIEEEEENGDTAVQSNISQKLPKEG
ASGNLGAGREAESEFQPHFLSAETGISGGQEVTRTEQSKFNPADSPSSESQGDTTDDQFE
SPKKKFKFKFPKKQLAALTQAIRTGTKTGKKTLQVVVYEEEEEDGTLKQHREAKRFEISG
SRSEDTPKGMLRRLEQPSLESTAPISRTDEIRKNTYRTLDSLEQTIKQLENTISEMSPKA
LVDTSCSSNRESVASSSHVAQEACPQSLLVLDEAPTALEPPSSVPSASRKGPTGTPQTSR
MPIPMSSKNRPGSLDKPGKQSKLQDPRQYRQANGSAKKAGGDCKPTFPSLPASKIPALSP
SSGKSSSLPSSSGDSSNFPNPPATKPSVPSNPLSPQTGRSAPSASLIPSVSNGSLKFQSP
THTGKGHHLSFSLQTQNGRAAPPSFSSSLPPPASPASLNQGAKSIRTIHTPSLTSYKAQS
GSSSKATQSTAKETS
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatgaaagccagaaatgtgagccgtgccttccttactcagcagacagcaga
cagatgcaggaacaaggaaagagcaattcgcaggtagcatccttagaagatgcagaatgt
cgcagaaccaaggaacgcctttctaatggaaacagtcgcgtttcagcttccaaatcttcc
cgaaacatcccaaggagacacactctaggtggacctcgaagttccaaagaaatactggga
atgcaaacatcagagatggatcgtaagagagaagctttcctagaacatctaaagcagaaa
tacccccatcatgccacagccatcatgggccaccaagagaggctgagagaccagacaaga
agccccaaactgtctcacagtcctcagcctcccaacttgggtgacccagtagagcattta
tcagaggcatctggagattctttggaagccatgtctgagggagaaactccaagtcctttt
tccagaggcagccggactcgagcgagccttccagtggtgaggtcgaccaaccagacgaaa
gaaagatctctgggggttctttatctccagtacggagatgaaaccaagcagctcaggatg
ccgaatgaaattacaagtgcagacacaatccgtgctctcttcgtaagtgcctttccacag
cagctcaccatgaaaatgctggagtcgcccagtgtcgccatttacatcaaagatgaaagc
agaaatgtctattatgagttaagtgatgtcaggaacattcaggacagatcccttctcaaa
gtgtacaacaaggatcctgcccatgcattcaaccacacaccgaaaactgtgaacggagac
gtgaggatgcagagagaaatcgtttatgcaagaggagatggccctggtgcctctcgacct
ggacccacaactcttctaccccacgccattccaaattctccaccgtccactcctgtgcca
cattccatgcctccctctccatccagaatcccttacggaggcacccggccgatggtcgtt
cctggtaacgccaccatccccagggacagactctccagcctgccggtctccagatccatc
tctcccagccccagcgccatcttggaaagaagagacgtgaagccagatgaagacatgagc
tccaagagcctcgcgatgtaccgaaacgagggtttctacgccgatccttacctttatcac
gaggggaggatgagcatagcctcttcgcacggcgggcacccactggatctccccgaccac
atcatcgggtatcaccgcgctgcagttcgttcagccagtgcttactgcagcccttctttg
caagcggaaatgcacatggagcagtcactgtacagacagaagtcaaggaagtatccagag
agcctcttgcctactctgggctccaaaacgcccccggcctctcctcaccgagtcagtgac
ctgaggatggtggagatgcacggtctccataacgcccacgggccctcccacaccatgcag
ccagaccgggtctcacccagccgccaggccttcaaaaaggagcccggcaccttggtgtac
attgagaagccacggacgactccaggattagccggaatggtggacctcggccctcctcta
gttgagaagcaagtgtttgcttatagcacggctacgatacccaaagacagagagaccaga
gagaggatgcaagccatggagaaacagattgccagtttaactggccttgttcagtctgcg
ctttttaaagggccccttacaagtaatagcaaagatgcatctagcgagaaaatgatgaaa
accgcagccaataagaaccacacagatggtgcaggaactccccaggtttccggcgggaag
cctcttggcgccctggagtcctcggggccacgcagccagctcccgcctgctggcacctcc
gccgcccacatgagcctgctcgacatgaagaggagtgtggccgaactcaggctccagctg
cagcagatgcgacagctccagctgcagaaccaggagctgctgagggcgctgatgaggaag
gctgagcaggaaatcaacagcaaggtgattgaaacgttgaagagactggaggaccctgtg
cagcgacagcgggtcctggtggaacaggagaggcagaagtacctgcacgaggaggaaaag
gttgtccggaagttgtgtgacctggaagacttcgttgaagatttaaagaaggactctgcc
ttggccagccgcgtggttactctaaaagatgtggaagacggggctttcctcctgcaccag
gtgggagaggcagtagcttccctgaaaggagaatttccaaccttacaaaacaagatgcga
gccatcctgcgcatagaagtggaggccgtgcggtttctgaaggaggagccgcacaggctg
gacagtctcctacagagagtgcgtggcatgaccgacgccctgaccacgctgcgcaggcat
gtcactgatgggctcttgaagggcacagatgcggccccggccgcacagtatgtcgtgatg
gaaaaggccacggccgcagaagtcctgaaggcccaggaggaggctccccgcgcctcgggc
cagcccctccccggtgcgggcgtccccggcgacgtgaaatcggaagtggtacccttgacg
gttcaccacgctcagagctctcctgtggtcatccagccgtcccagctctcctccgcgctg
ctgaaccctgcccagcacttgccaggggggcccgggcctcacccggccagccctcccgct
gtcacacaggaggtgacctcagctctgcagtccccgcagatgcccgggaatggttcctcc
atgcagagcctgttcatggacgaaatccacagtgtgagtgccaagaacagggcagtgtct
atcgagaaagcagaaaggaaatgggaagagaaaaggcaaaatctggaccactataacgga
aaagagtttgagaagctcctagaagaagcccaggccaatattatgaagtcaattccaaac
ctggagatgccgccagcctcgggcccacagccaaagggcgatgctccagtggacaagcta
gaaccttcagaagactctccaaattcagaacaggacttggacaagctgggggctaagtcc
ccgcctcgtcctcccccacctccacggaggagctatctgccaggatcggggctcaccacc
acgaggtccggcgatgtggtctacaccagcaggaaggagaatgccaccacaaaggcaagc
agtgaagatgctggaccaagcctgcaggctagagccacaaagtgtccagcagaggagcct
gcttcagcctgggccccgtcaccaccacctgtcactacttcctccttcaaggatgaggag
gaagaagaaggagacaaaatcatggcagaactccaggcattccagaagtgttcctttatg
gatgtaaattcaaacagtcacgctgagcagtcccgggctgacagtcaccttaaagacact
aggccgggggccacagccctccccaaggagaagaagaatttggaatttttccacgaagac
gtacggaaatctgatgttgaatatgaaaatggcccccaaatggaatcctggaaggttacc
gcaggggcttccatacctagtgaccatcctaagtgggaaagaggaatggagaatagtatt
tctgatgcagcaagaacatcagaatacaaaactgacatcttaatgaaggaaagttccata
tccactaagagtttacttagagacggtagaaactattcccagaaaaacgtgtccagggtc
aattctagtttctctggcgttagttccttagaagatgaaatcaacaaaggacctaaaatc
tcagggctgccgtaccctgtatgtgacactgagaatcagaagatgaattatgggaagaca
aagggggtgatccagcaaggacaagaaaatacagataagtgtcaccttccctctcccact
agatcaaccgaatcgactattcgtgatgtcaaaactcaagaccgagaggttcccttgaca
gagtttggccaagttgtcctaagaccgaagggagccaggcccgctaacgtgacgcctgat
gaggatggagagtcaacggcaggctctcccaccgaggagagtgcaaccaccgacagcatt
gccttcatgatcaccaaaaccgcggtccaagttctctccagcggggaggtccgcgacata
gtgagcaaacaggggcaagatgtacagacggtcaacattgacgccaaaaaagagacagct
tcccagcaagaaggcactgacagcgaagagccggtcgtgtgcctggacaagaaacccgtg
atcatcatttttgatgaacccatggacatccggtccgcatacaagagactttcaaccata
tttgaggaatgcgacgaggaactggagagaatgatgacagaggagaagatagaggaagag
gaggagaatggagatactgcggtccagagtaacatctcccaaaagcttcctaaggagggg
gcctcgggcaacctcggagcagggcgggaggctgagagtgaattccagccgcacttcctt
tcagcggagaccggaatatcaggaggacaggaagtgactagaaccgagcagagcaagttc
aacccagccgattctccaagttcagaaagccagggcgacacgaccgacgaccagtttgaa
agccccaagaaaaagttcaaattcaaattcccgaaaaagcagctcgccgctcttacgcaa
gccattcgcacgggaaccaagacggggaagaagacgttgcaggtggtggtctatgaagag
gaggaagaggacggcactttgaagcagcacagagaagccaagcgcttcgagatcagcggg
tctcgatccgaagacaccccgaaaggtatgctcaggagactagagcagcccagtctggag
agcacagctccgatttcgagaactgatgaaatcagaaaaaatacctacaggacgttggac
agcctggagcagaccatcaaacagctggaaaatacgatcagtgagatgagtcccaaagcc
ctagttgatacctcgtgttcctccaacagagagtctgttgcaagctcatcccacgtggcc
caggaggcctgtccccagtccttgctagtcctggatgaagctcccactgccctagagccc
ccctcgtctgtaccttcagcttcacgtaagggccccacgggaacccctcagacgagcagg
atgccgatccccatgagttccaagaacagacccggaagcctggacaaacctggcaagcag
tccaaactgcaggacccccgccaatatcgtcaggctaatggaagtgctaagaaagctggt
ggggactgtaagcctactttcccctccttacctgcttctaagattccagccctttctccc
agctctgggaaaagcagttctctgccttcttctagtggtgacagctctaacttccctaat
ccacctgctactaaaccatcggttccttctaaccctctcagcccccaaacaggacgatct
gctccctctgcctccctcatcccctctgtctctaatggctccttgaagtttcagagcccc
actcatacaggtaaaggtcaccatctctcattctcactgcagactcagaatggccgagca
gcccctccttccttctcctcctccctgcccccccctgcctccccagcttcactgaatcaa
ggtgccaagagcatcagaaccatccatactcctagcctcaccagctacaaggcacagagc
ggaagttcaagcaaagccacccagtccacagcaaaggaaacctcttaa
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