KEGG   Phocoena sinus (vaquita): 116749097
Entry
116749097         CDS       T07759                                 
Symbol
HCN4
Name
(RefSeq) LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
  KO
K04957  hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04024  cAMP signaling pathway
psiu04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    116749097 (HCN4)
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    116749097 (HCN4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:psiu04040]
    116749097 (HCN4)
Ion channels [BR:psiu04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   116749097 (HCN4)
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2 LPD1
Other DBs
NCBI-GeneID: 116749097
NCBI-ProteinID: XP_032478967
Ensembl: ENSPSNG00000003472
LinkDB
Position
2:62638836..62680338
AA seq 1201 aa
MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSA
AAGGTEPRGAALGAADSEGSTRGAGKSSTNGDCRRFRGSLASLGSRGGGGAGAGGGSSHG
HLHDSAEERRLIAEGDASPGEDRTPPGLAAETERSGASAQPAASPPPPQQPPQPVPASCE
QPSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAV
EREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNV
VSDTFFLIDLVLNFRTGXVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVE
TRIDSEVYKTARALRIVRFTXILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN
LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIG
YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF
HKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD
PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE
ICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSI
LLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQA
PLQAAAATTSVAIALTHHPRLPAAIFRPPPGPGLGGLGAGQTPRHLKRLQSLIPSALGSA
SPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGVGSSSSAPTPSAAAA
VAAATAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQANQPAPPLPGARGGLGLAEHFL
PPPASARSPSSSPGQLGQPPGELSPGLATGPPSTPETPPRQPERLSFAAGASGGASPVAF
TPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRL
TQDLKLISASQPALPQDGAQTLRRASPHSSGESVAAFQLFPRGGGGSGGSGGLGLPGRPY
GAVPGQHVTLPRKTSSGSLPPPISLFGARATSSGGPPLTAAPQREPGARSEPVRSKLPSN
L
NT seq 3606 nt   +upstreamnt  +downstreamnt
atggacaagctgccgccgtccatgcgcaagagactctacagccttccgcagcaggtgggg
gccaaggcgtggatcatggacgaagaagaggacgccgaggaggagggggctgggggccgc
caggaccccagccgcaggagcatccggctgcggccgctgccttcgccctcgccctcggcg
gccgcgggcggcacggagccccggggtgcggccctcggggcggcagacagcgaggggtcg
acccgcggcgcgggcaagtctagcactaacggcgactgcaggcgcttccgcgggagcctg
gcatcgctgggcagccggggcggcggcggcgccggagcggggggcggcagcagtcacggg
cacctgcatgactccgcggaggagcggcggctcatcgccgagggcgacgcgtcccccggt
gaggacaggacgcccccgggcctggcggccgagaccgagcgctctggcgcctcggcacag
cccgcagcctcgccgccgccgccccagcagccgccgcagccggtccccgcctcctgcgag
cagccctcggtggacaccgcgatcaaagtggagggaggtgcggccgccggcgaccagatc
ctccctgaggccgaggtgcgcctgggccaggccggcttcatgcagcgccagttcggggcc
atgctccagcccggggtcaacaaattctccctgaggatgttcggcagccagaaggcggtg
gagcgcgagcaggagagggttaagtcggccgggttttggattatccacccctacagcgac
ttcagattttactgggacctgaccatgttgctgctgatggtaggaaacctgatcatcatt
cctgtgggcatcaccttcttcaaggatgagaacaccacaccatggattgtcttcaacgtg
gtgtcggacacgttcttcctcatcgacttggtcctcaacttccgcacagganttgtggtg
gaggacaacacagagatcatcctggacccacagcggattaagatgaagtacctcaaaagc
tggttcgtggtggatttcatctcctccatccccgtggactacatcttcctcattgtggag
acacgcatcgattcggaggtctacaagactgcccgggccctgcgcatcgtccgtttcacc
nagatcctcagcctcctgcgcctcttgcgtctctcccgcctcattcgatatattcaccag
tgggaagagatcttccacatgacctacgacctggccagcgccgtggtgcgcatcgtgaac
ctcatcggcatgatgctgctgctctgccactgggacggctgcctgcagttcctggtgccc
atgctgcaggacttccctgacgactgctgggtgtccatcaacaacatggtgaacaactca
tggggaaagcagtactcctacgccctcttcaaggccatgagccacatgctgtgcatcggg
tacggccggcaggccccggtgggcatgtcagacgtctggctcaccatgctcagcatgatc
gtgggggccacctgctacgccatgttcatcggccacgccaccgccctcatccagtctctg
gactcctcccggcgccagtaccaggagaagtacaagcaggtggagcagtacatgtccttc
cacaagctcccgcccgacacccggcagcgcatccatgactactacgagcaccgctaccag
ggcaagatgttcgacgaggagagcatcctgggcgagctgagcgagccgctgcgggaggag
atcatcaactttaactgccgaaagctggtggcctccatgccgctgtttgccaacgcggac
cccaactttgtgacctccatgctgaccaagctgcgcttcgaggtcttccagccgggggac
tacatcatccgtgaaggcaccatcggcaagaagatgtatttcatccagcacggggtggtc
agcgtgctcaccaagggcaacaaggagaccaagctggcggatggctcctactttggagag
atctgcctgctgacgcggggccggcgcacagccagcgtgagggctgacacctactgccgc
ctctactcgctgagcgtggacaacttcaacgaggtcctggaggagtaccccatgatgcgg
cgggccttcgagacggtggcgctggaccgcctggaccgcatcggcaagaagaattccatc
cttctccacaaagtccagcacgacctcaactcaggcgtcttcaactaccaggagaacgag
atcatccagcagatcgtacagcacgaccgggagatggcgcactgcgcccaccgcgtccag
gccgccgcctctgccactccgacccccacgcccgtcatctggaccccgctgatccaggcg
ccgctgcaggccgccgccgccaccacttccgtggccatcgcgctcacccaccacccgcgc
ctgcccgccgccatcttccggcctcccccggggcccgggctgggcggcctcggggcaggg
cagacgccccggcacctgaagcggctgcagtccctgatcccgtcggcgctgggttccgcc
tcgcccgccagcagcccgtcgcaggtggacacgccgtcttcctcctccttccacatccaa
cagctggctggattctctgcacccgccggactgagcccgctccttccctcgtccagctct
tccccgccgcctggggtgggcagctcctcctccgcacccacgccatctgctgcggcggcc
gtggccgccgccacagccgggttcggccacttccacaaggcgctgggaggctccctgtcc
tcctcggactctcccctgctcaccccgctgcagccgggcgcccgctccccacaggccaac
cagccggcgcccccgctgcccggggcccggggcggcctgggactggcggagcacttcctg
ccacccccagcctcggccaggtccccgtcgtccagccccgggcagctgggccagcctccc
ggggagctgtccccgggtctggccaccggcccaccaagtacgccagagacacccccgcgg
cagcctgagcggctgtcctttgcggcaggggcctcagggggggcctctcctgtagccttt
accccccgaggaggtctcagcccccccggccacagcccaggccctccaagaactttccca
agtgcccctccccgggcatccggctcccacggttccttgctcctgcctccggcatccagc
cccccgccaccccaagtcccccagcgccggggcaccccgcccctcaccccgggccgcctc
acccaggacctcaagctcatctcagcctctcagccggccctaccccaggacggggcacag
actctccgcagagcctccccacactcctctggggagtccgtggctgccttccaactcttt
cccagaggcgggggcggcagcgggggcagcgggggcctcggtctccccgggaggccctat
ggtgccgtccctggccagcacgtcactctgcctcggaagacatcctcaggttctttgcca
ccccctatttctttatttggggcaagagccacctcttctgggggtccccctctgactgct
gctccccagagggaacctggggccaggtctgagccagtgcgctctaaactgccctccaat
ctatga

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