Phocoena sinus (vaquita): 116749709
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Entry
116749709 CDS
T07759
Symbol
HECTD1
Name
(RefSeq) E3 ubiquitin-protein ligase HECTD1 isoform X1
KO
K12231
E3 ubiquitin-protein ligase HECTD1 [EC:
2.3.2.26
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116749709 (HECTD1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116749709 (HECTD1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
HECT type E3
116749709 (HECTD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Sad1_UNC
MIB_HERC2
BTHB
Ank_2
Ank
Ank_4
Ank_3
Ank_5
F5_F8_type_C
DUF6735
Motif
Other DBs
NCBI-GeneID:
116749709
NCBI-ProteinID:
XP_032480260
Ensembl:
ENSPSNG00000016911
LinkDB
All DBs
Position
2:complement(110298832..110392340)
Genome browser
AA seq
2610 aa
AA seq
DB search
MADVDPDTLLEWLQMGQGDERDMQLIALEQLCMLLLMSDNVDRCFETCPPRTFLPALCKI
FLDESAPDNVLEVTARAITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNRTSRDLA
EQCVKVLELICTRESGAVFEAGGLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQ
DSSLEICVESLSSLLKHEDHQVSDGALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRM
AAAGGTVSGPSSACKPGRSTTGAPSTAADSKLSNQVSTIVSLLSTLCRGSPVVTHDLLRS
ELPDSIESALQGDERCVLDTMRLVDLLLVLLFEGRKALPKSSAGSTGRIPGLRRLDSSGE
RSHRQLIDCIRSKDTDALIDAIDTGAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGA
DVNRGQRSSSLHYAACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARERGHSEVVAILQ
SPGDWMCPVNKGDDKKKKDTNKDEEECNEPKGDPEMAPIYLKRLLPVFAQTFQQTMLPSI
RKASLALIRKMIHFCSEALLKEVCDSDVGHNLPTVLVEITATVLDQEDDDDGHLLALQII
RDLVDKGGDIFLDQLARLGVISKVSTLAGPSSDDENEEESKPEKEDEPQEDAKELQQGKP
YHWRDWSIIRGRDCLYIWSDAAALELSNGSNGWFRFILDGKLATMYSSGSPEGGSDSSES
RSEFLEKLQRARGQVKPSTSSQPILSAPGPTKLTVGNWSLTCLKEGEIAIHNSDGQQATI
LKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVRTMARDL
YDDHFKAVESMPRGVVVTLRNIATQLESSWELHTNRQCIESENTWRDLMKTALENLIVLL
KDENTISPYEMCSSGLVQALLTVLNNSMDLDMKQDCSQLVERINVFKTAFSENEDDESRP
AVALIRKLIAVLESIERLPLHLYDTPGSTYNLQILTRRLRFRLERAPGETALIDRTGRML
KMEPLATVESLEQYLLKMVAKQWYDFDRSSFVFVRKLREGQNFIFRHQHDFDENGIIYWI
GTNAKTAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDILSRDNSALNCHSNDDKNAWFAID
LGLWVVPSAYTLRHARGYGRSALRNWVFQVSKDGQNWTSLYTHVDDCSLNEPGSTATWPL
DPPKDEKQGWRHVRIKQMGKNASGQTHYLSLSGFELYGTVNGVCEDQLGKAAKEAEANLR
RQRRLVRSQVLKYMVPGARVIRGLDWKWRDQDGSPQGEGTVTGELHNGWIDVTWDAGGSN
SYRMGAEGKFDLKLAPGYDPDTVASPKPVSSTVSGTTQSWSSLVKNNCPDKTSAAAGSSS
RKGSSSSVCSVASSSDISLGSTKTERRSEIVMEHSIVSGADVHEPIVVLSSAENVPQTEV
GSSSSASTSTLTTEMGSENAERKLGPDSSVRAPGESGAISMGIVSVSSPDVSSVSELTNK
EAASQRPLSSSASNRLSVSSLLAAGAPMSSSASVPNLSSRETSSLESFVRRVANIARTNA
TNNMNLSRSSSDNNTNTLGRNVMSTATSPLMGAQSFPNLTTPGTTSTVTMSTSSVTSSSN
VATATTALSVGQSLSNTLTTSLTSTSSESDTGQEAEYSLYDFLDSCRASTLLAELDDDED
LPEPDEEDDENEDDNQEDQEYEEVMILRRPSLQRRAGSRSDVTHHAVTSQLPQVPSGAGS
RPIGEQEEEEYETKGGRRRTWDDDYVLKRQFSALVPAFDPRPGRTNVQQTTDLEIPPPGT
PHSELLEEVECTPSPRLALTLKVTGLGTTREVELPLTNFRSTIFYYVQKLLQLSCNGNVK
SDKLRRIWEPTYTIMYREMKDSDKEKENGKMGCWSVDHVEQYLGTDELPKNDLITYLQKN
ADAAFLRHWKLTGTNKSIRKNRNCSQLIAAYKDFCEHGTKSGLNQGAISTLQSSDILNLT
KEQPQAKAGNGQNSCGVEDVLQLLRILYIVASDPYSRISQEEGDEQPQFTFPPDEFTSKK
ITTKILQQIEEPLALASGALPDWCEQLTSKCPFLIPFETRQLYFTCTAFGASRAIVWLQN
RREATVERTRTTSSVRRDDPGEFRVGRLKHERVKVPRGESLMEWAENVMQIHADRKSVLE
VEFLGEEGTGLGPTLEFYALVAAEFQRTDLGAWLCDDNFPDDESRHVDLGGGLKPPGYYV
QRSCGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLVDLPISKPFFKLMCMGDIK
SNMSKLIYESRGDRDLHCTESQSEASTEEGHDSLSVGSFEEDSKSEFILDPPKPKPPAWF
NGILTWEDFELVNPHRARFLKEIKDLAIKRRQILSNKGLSEDEKNTKLQELVLKNPSGSG
PPLSIEDLGLNFQFCPSSRIYGFTAVDLKPSGEDEMVTMDNAEEYVDLMFDFCMHMGIQK
QMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGF
LRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKVDATDASYPSVNTCV
HYLKLPEYSSEEIMRERLLAATMEKGFHLN
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtggatccagatacattgctggaatggctacagatgggacagggagatgaa
agggacatgcaactaatagcccttgaacagctatgcatgctgcttttgatgtctgacaac
gtggatcgttgttttgaaacatgtcctcctcgcactttcttaccagccctctgcaaaatt
tttcttgacgaaagtgctccagacaatgtgctagaggtgacagcccgtgccataacatac
tacctggacgtatctgcagaatgcacccgaaggattgttggggtagatggagctataaaa
gcactttgcaatcgtttggttgtagtcgaacttaacaacaggacaagcagagacttagct
gaacaatgtgtaaaggtgttagaactgatatgcactcgtgagtcaggtgcagtcttcgag
gctggtggtttgaattgtgtgcttaccttcattcgtgacagtggacacctggttcataaa
gataccttgcactctgccatggctgtggtatcaagactctgtggcaaaatggaacctcaa
gattcttctttagaaatttgtgtagaatctctgtctagtttattaaaacatgaagatcat
caggtttcagatggagctctgcgatgttttgcatcactagctgaccgatttacccgtcgt
ggtgttgacccagctccattagccaagcacggattaactgaggagctattgtctagaatg
gctgctgctggtggtactgtatcagggccatcgtcagcttgcaaaccaggtcgcagcacc
acaggagcgccttccacagctgcagattccaaattgagtaaccaggtgtctacaattgta
agtctgctctcaacactttgcagaggctctccagtagtaacgcacgatctcctgaggtca
gaacttccagattcaattgaaagtgcattgcagggtgatgaaagatgtgtgcttgatacc
atgcgtttggttgaccttctcttggtgctattatttgaaggacgaaaggctttgccaaag
tctagtgctggatccacaggcagaatcccaggactacggagattggatagttctggggaa
cgctcacatcggcagcttatagactgtattcgaagtaaagataccgatgcactcatagat
gcaattgacacaggagcctttgaagtaaattttatggatgatgtgggtcagactctatta
aactgggcctctgcttttggaactcaggaaatggtagaatttctttgtgaaagaggtgct
gatgttaatagaggtcagaggtcatcatcattacattatgctgcatgttttggaagacct
caagtagcaaagactctcttacggcatggtgcaaatcccgatctgagagatgaagatggg
aaaactccattagataaagctcgggaaaggggccatagtgaagtagtagctattcttcag
tctccaggtgattggatgtgtccagttaataaaggagatgataagaaaaagaaagataca
aacaaagatgaagaagaatgtaatgagccgaaaggagatccagaaatggcacccatatac
ttgaaaaggttactgccagtatttgcacaaacatttcagcagactatgctgccttctata
aggaaagcaagtcttgctctgattcgaaaaatgattcatttttgctctgaagcactcttg
aaagaagtttgtgattctgatgttggtcacaatttgcctacagtactagtggaaatcact
gcaacagttcttgatcaagaggacgacgatgatggccacttgctggctttgcagatcata
agggacttagtagataaaggtggtgatatttttttggatcagctagccagacttggtgta
attagcaaagtgtcaactttggcaggtccttcctctgatgatgagaatgaagaggaatca
aaaccagaaaaagaagatgaaccacaggaagatgctaaagaattgcagcagggtaagcca
tatcattggagagactggtccatcattaggggaagggactgcttatatatatggagtgat
gcagcagccttggaactatctaatggcagtaatggatggtttagatttatcttggatgga
aaacttgccaccatgtattcaagtggtagtcctgaaggtggatcggatagttcagaaagc
agaagtgaattcttagagaagttacaaagagctcgaggccaagtaaagccatctacttca
agtcaacctatactctcagcaccaggacccactaaactcactgtagggaattggtcacta
acatgtttgaaagaaggagaaattgctattcataactcagatggccagcaagcaacgata
ttgaaagaagatttacctggttttgtgtttgaatctaatagaggaaccaagcattcattt
actgcagaaacttctctgggttcagaatttgtgactggctggactggcaaaagaggcaga
aaactaaaatctaagttagaaaaaactaagcaaaaggtacgaactatggctcgagattta
tatgatgaccactttaaagctgttgaaagcatgcctcgtggagtagtggtaacactcaga
aacatagcaactcagttagagtcatcttgggaacttcatacaaatagacaatgtattgag
agtgagaacacttggagagatttaatgaagacagctttagaaaatctaattgtacttttg
aaggatgaaaacacaatttcaccatatgaaatgtgcagtagtggcttggtgcaagcgctt
cttactgttttaaataatagcatggatttagatatgaagcaagattgtagtcaactggta
gaaagaataaatgtttttaaaacagcctttagtgaaaatgaagatgatgaaagtcgacca
gctgttgcattaatccgaaagttaatagctgtactagaatctattgaacgtctacctctc
catttgtatgataccccaggatccacttataacctccagatacttacaagaagattaaga
tttcggttggaacgtgcacctggtgaaactgcattgatagacaggaccggcaggatgttg
aagatggagcccttagctacagttgaatctctagaacagtatctcttaaaaatggtagca
aagcagtggtatgattttgaccgatcttcatttgtttttgttcgaaaattaagagaaggc
caaaattttatatttcggcaccagcatgattttgatgaaaatggaatcatttactggatt
gggacaaatgccaaaactgcatatgaatgggttaatccagctgcttatggacttgtagta
gtaacatcatcagaaggaagaaatctaccttatggccgcttagaagacatattaagtcgt
gacaattcagctttaaattgtcatagcaatgacgataagaatgcctggtttgccatagat
ctgggtctgtgggtggtaccatcagcatatacacttcgacatgctcgtggttatggaagg
tctgcactgagaaattgggttttccaggtatccaaagatggacagaactggacttctttg
tatacccatgttgatgactgcagtctcaatgaaccagggtcaacagccacctggcctctt
gatccaccgaaggatgagaaacaagggtggcgacatgtgagaattaaacagatggggaag
aatgctagtggccaaacccattatctctcactatctggatttgaactttatggcactgta
aatggagtatgtgaagatcagctaggaaaagcagctaaggaagcagaagctaaccttaga
agacagagacgtctagtacgctcccaggtactgaagtacatggttccaggggctcgtgtg
atcagaggccttgattggaaatggcgggatcaggatggcagcccacagggagaaggcacc
gtcacaggagaactgcataatggctggattgatgtcacctgggatgctggtggctcaaac
tcttaccgtatgggcgcagaaggaaaatttgacctcaagcttgcaccagggtacgaccct
gatacagtggcatcacccaaacctgtttcatccactgtttcaggcacaacgcaatcatgg
agcagcttggtgaaaaacaactgtccagacaagacatctgctgctgcaggctcctcaagt
agaaaaggaagcagcagttctgtgtgtagcgtggccagtagcagcgacatcagcttgggt
tcgaccaaaacggaacggagatcagaaattgtaatggaacacagtatagtttcaggagct
gatgtccatgaaccaattgttgttctttcatctgctgaaaacgtccctcaaacagaagta
gggtcatcttccagtgcaagtaccagcaccttaacaacggaaatgggaagtgaaaatgct
gaaagaaagttaggccctgatagttctgttcgtgctcctggggagtctggtgcaatatcc
atgggaattgttagtgttagttctcctgatgttagttcagtatctgagttaactaataaa
gaagcagcttcacaacggccccttagctcttcagcaagtaacagactatcagtgagttct
ctgttagctgctggggcccctatgagctctagtgcaagtgttcctaacctgtcctcaaga
gaaacatctagcttggagagttttgtaaggagagtggcaaacatagcacggactaatgcc
acgaacaacatgaatctaagccgaagcagcagtgataacaacactaatactttggggagg
aatgtgatgagcacagcaacttctcctcttatgggtgctcagagtttccctaatttgacc
acacctggtactacatcaacagtgactatgtcaacatccagtgtgactagcagcagcaat
gtagctacagcaacaacagctttatcagttggtcagtcattaagtaataccttgaccacc
agcctcacatccacctccagtgagagtgacacaggtcaggaagcagaatattccttatat
gatttccttgatagctgccgtgccagtactctgctagctgagctagatgatgatgaggac
ttgccggagccagatgaggaagatgatgaaaatgaagacgacaatcaggaggaccaagaa
tacgaggaggttatgattctgagacgtccatccctgcagcgtcgagctggctcccgctct
gatgtaacacaccatgctgtcacctcacagctaccacaggtcccatctggagcagggagc
cgacctattggggagcaggaagaagaagagtatgaaactaaagggggacgccggagaaca
tgggatgatgattatgtactaaagcggcagttttcagctttggttcctgcttttgatcct
agacctggtcgtactaatgtccagcagacaactgatctagaaattccacccccaggaaca
cctcattcagagctcttggaagaagttgaatgtactccgtcacctcgattagccctcact
ttgaaagtaacaggtcttggaacaactcgtgaagttgaattaccactcactaatttcaga
tcaaccatcttttactatgtacagaaattgcttcagttgtcgtgtaacggcaatgtgaaa
tcagataaacttaggcgtatttgggagccaacatacacaattatgtacagagaaatgaaa
gattctgacaaagaaaaggaaaatggaaaaatgggttgttggtctgtagaccatgtggaa
cagtatcttggcactgatgaattaccaaagaatgacttgataacctacctgcagaagaat
gcagacgccgctttcctgcgccactggaaattaactggcactaataaaagtattaggaaa
aacagaaattgttctcagctcatagctgcatataaggatttttgtgagcatggaacaaag
tctgggttaaaccagggggccatttctactcttcaaagtagtgatattcttaatttgaca
aaagaacaacctcaggccaaagcaggcaatggacagaattcttgtggagtagaagatgtc
cttcagcttctgcgtattctgtatatagttgcaagtgacccttattcaagaatatcccaa
gaagaaggtgatgagcagcctcagtttacttttccaccagatgaattcactagcaaaaaa
atcacaacaaaaattttgcagcagattgaggagccattggcattggcaagtggggctctg
ccagactggtgtgaacagttaaccagcaagtgtccttttctaataccatttgaaactaga
cagctgtatttcacatgtacagcatttggtgcatcaagagcaatagtgtggttacaaaac
cgacgtgaggccactgtggaaagaacaaggaccacaagtagtgtaaggcgagatgatcct
ggagagtttcgtgttggtcgtctcaagcatgaaagagtgaaagttccacgtggtgaatca
ctgatggagtgggctgagaatgtcatgcaaatacatgcagatcggaaatcagttcttgag
gttgaatttttaggagaagaaggaactggcttggggcccacattagaattttatgctctg
gtggcagcagaattccagagaactgatttgggagcttggctttgtgatgataactttcca
gatgatgaatctcgtcatgtcgatcttggaggtggattgaaacctcctggatactatgtt
cagagatcatgtggactatttacagctccatttccacaagatagtgatgagcttgaaagg
atcacaaaactctttcatttccttggaattttcttggccaaatgcattcaagacaataga
cttgtggatttacctatttctaaacctttctttaaacttatgtgtatgggtgacattaaa
agcaatatgagtaaactgatttatgagtcacgaggtgatagagacttacactgtactgaa
agtcagtctgaagcctctacagaagaaggtcatgattcactctcagtaggaagctttgaa
gaggattcaaaatcagaatttattctagatccccccaaaccaaaacccccagcttggttt
aatggaattttaacttgggaagactttgaactagtaaacccacacagagccagattttta
aaagaaattaaagaccttgctatcaagaggcgccagattttaagcaacaaaggtctttct
gaagatgagaagaacacaaaattacaagaactagtgctgaagaatccatcaggttctggg
cctccacttagcatagaggatttaggtttaaatttccagttttgcccttcctcaagaata
tatggttttacagctgtggatctgaagccaagtggtgaagatgagatggtaacaatggat
aatgcagaagaatatgtggatttgatgtttgacttttgtatgcatatgggtattcagaaa
cagatggaagcctttagagatgggtttaataaagtttttccaatggagaaattaagttcc
ttcagccatgaagaagtccaaatgattctttgtggaaatcagtcgccatcctgggcagca
gaggatattattaattatactgaacctaagttgggttatacacgtgatagcccaggtttc
cttaggtttgtgagggttttatgtggcatgtcttcagatgagaggaaggcattcctgcag
tttaccactggttgttcaactctacccccaggtggactggctaacttgcatcctaggctc
acagttgtacgcaaggttgatgctactgatgcaagctacccatcagtgaatacatgtgta
cattatctgaagttgccggaatactcttcggaggagatcatgagagagcgcctgctagct
gctacaatggagaaaggctttcatctcaactga
DBGET
integrated database retrieval system
