Phocoena sinus (vaquita): 116751402
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Entry
116751402 CDS
T07759
Symbol
KCNN1
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04911
Insulin secretion
psiu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
116751402 (KCNN1)
04929 GnRH secretion
116751402 (KCNN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116751402 (KCNN1)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116751402 (KCNN1)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
IRK
DALR_1
Nuf2_DHR10-like
APG6_N
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
116751402
NCBI-ProteinID:
XP_032483126
Ensembl:
ENSPSNG00000003747
LinkDB
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Position
3:complement(12014189..12038803)
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AA seq
543 aa
AA seq
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MNSHRHNGFGGRPLGGGLGALGRDPPDPEAGHPPQPPNGPGIQVVVAKSEPAQPSPGSPR
GQPQDQEEEEDDEEDEAGRQRGSGKPPSVGHRLGHRRALFEKRKRLSDYALIFGMFGIVV
MVTETELSWGVYSKESLYSFALKCLISLSTVILLGLVVLYHAREIQLFMVDNGADDWRIA
MTCERVFLISLELAVCAIHPVPGHYRFTWTARLAFTYAPAAAEADVDVLLSVPMFLRLYL
LGRVMLLHSRIFTDASSRSIGALNKITFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWT
VRVCERENMYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGC
TALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTRLVKKPDH
ARVRKHQRKFLQAIHQLRSVKIEQGKLNDQTNTLADLAKTQNVMYNLMSELHAQHEELEA
RLAALESRLDALGVSLQALPGLIAQAIRPPPPPLPPRPGSGPLDQVARSPPHRRPPTAPS
DCG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccacagacacaatggcttcgggggacggccactgggtggcgggctgggtgcc
ctgggccgagaccctccagaccccgaggccggccacccgcctcagcctccaaatggccca
ggcatccaggtggtggtagccaagagtgagccggcccagccctcgcccggcagcccccgg
gggcagccccaggaccaggaagaagaggaagatgatgaggaggatgaggcgggtaggcag
aggggctcaggaaagccccccagcgttggccaccgtctgggccaccggcgggcgctcttt
gagaagcggaagcgtctcagtgactacgctctcatctttggcatgttcggcattgttgtc
atggtgacggagacggagctgtcctggggggtctacagcaaggagtccctgtactcattt
gcactcaaatgtctcatcagcctctccaccgtcatcctgctgggcctggtcgtcctctac
cacgcccgggagatccagctgttcatggtggacaacggggcagacgactggcgcatcgcc
atgacctgcgagcgcgtcttcctcatctccctggagctggccgtgtgcgccatccacccg
gtgcccggccactaccgcttcacgtggacagcgcggctagccttcacgtacgcgccggca
gcagccgaggccgacgtggacgtgctgctgtctgtgcccatgttcctgcgtctctacctg
ctgggccgtgtcatgttgctgcacagcaggatcttcacggacgcctccagccgcagcatc
ggcgccctcaacaagatcaccttcaacacgcgcttcgtcatgaagacactcatgaccatc
tgcccgggcaccgtgctcctcgtcttcagcatctcctcctggatcatcgccgcctggacc
gtgcgggtctgtgagagggaaaacatgtatcacgacaagcaggaagtgaccagcaacttc
ctgggggccatgtggctcatctccatcaccttcctctccatcggctacggcgacatggtg
ccccacacttactgcgggaagggcgtgtgcctgctcactggcatcatgggggctggctgc
acggcgctcgtggtggccgtggtggcccggaagctggagctcaccaaggcagagaaacac
gtgcataacttcatgatggacactcagctcaccaagcgggtaaaaaacgccgctgctaac
gttctcagggagacgtggctcatctacaaacacaccaggctggtgaaaaagccagaccac
gcccgggttcggaaacaccagcgtaagttcctccaagccatccatcagctccggagtgtg
aagattgagcaagggaagctgaatgaccagaccaacacgctcgcagacctggccaagacc
cagaatgtcatgtacaacctcatgtccgagctgcacgcccagcacgaggagcttgaggcc
cgcctggctgcccttgaaagccgcctggatgcattgggtgtctccctgcaggccttgccg
ggcctcatcgcccaagccatacgcccgcctccaccacccctgcctccccggcctggctcc
ggcccactggaccaggtggctcggagtcccccacaccggcggccacccacggccccttca
gactgtgggtga
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