Phocoena sinus (vaquita): 116751537
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Entry
116751537 CDS
T07759
Symbol
OTP
Name
(RefSeq) homeobox protein orthopedia isoform X1
KO
K24901
homeobox protein orthopedia
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751537 (OTP)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116751537 (OTP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116751537
NCBI-ProteinID:
XP_032483462
Ensembl:
ENSPSNG00000004725
LinkDB
All DBs
Position
3:111905474..111915486
Genome browser
AA seq
325 aa
AA seq
DB search
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPG
EDITTVGSTPASLAVSSKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCS
LAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSS
DVWRGTSIASLRRKALEHTVSMSFT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcacgccgacctcctggacgccaggctaggtatgaaagatgccgccgagctt
ctgggccaccgggaggcggtgaagtgtaggctgggcgtggggggctccgaccccgggggc
catccgggggacctagcgcccaactccgacccagtcgagggagccactctgctgcccggg
gaggacatcaccacagtgggctctacgccggcctctctggcggtgagctcaaaggacccg
gacaagcagccggggccccaaggtggcccgaaccccagccaagcaggtcagcagcagggc
caacagaagcagaagcgccaccggacgcgcttcaccccggcgcagctcaacgagttggag
aggagcttcgccaagactcactaccccgacatcttcatgcgcgaggagctggcgctccgt
atcgggctgacggagtcccgagtgcaggtctggttccagaaccggcgagctaagtggaag
aagcgcaagaagaccaccaacgtgttccgtgcgccggggacgctgctgcccacgccaggc
ctgcctcagttcccgtcggccgccgccgccgccgccgccgccatgggcgacagcctgtgc
tctttccatgccaacgacacccgctgggcggcagccgccatgccgggagtgtcgcagctg
ccgctaccgccggcgctgggcaggcagcaagccatggcacagtcgctgtcccagtgcagc
ctggcggccgggccgccgcccaactccatgggcctgtccaacagcttggcgggctccaac
ggcgcggggctgcagtcgcacctctaccagcctgcctttcccggcatggtgcctgcctcc
ctccccggccccagcaatgtctccggctcgccccagctctgcagctccccggacagcagc
gacgtgtggcggggcacgagcatcgcctccctccgccgcaaggcgctagagcacacagtc
tccatgagcttcacttaa
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