Phocoena sinus (vaquita): 116752997
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Entry
116752997 CDS
T07759
Symbol
NRROS
Name
(RefSeq) transforming growth factor beta activator LRRC33 isoform X1
KO
K26317
transforming growth factor beta activator LRRC33
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116752997 (NRROS)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
116752997
NCBI-ProteinID:
XP_032486235
Ensembl:
ENSPSNG00000018758
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Position
4:complement(72411357..72435362)
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AA seq
699 aa
AA seq
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MCSAALEMELLPLWLCLGFHFLTVEWRNRSGNVMATSQGGCELLDGVADCRGQNLASVPS
NLPPSSQTLLLDANPLKTLWNHSLQRYPLLESLSLHSCHLEHISRGAFQEQARLCSLALP
DNSLSESYKETAAALHGLRGLRRLDLSGNSLTEDMAALMLQNLSSLESVSLARNTIMRLD
DSVFEGLGRLRELDLQRNYIFEIEGGAFDGLPELRHLNLAYNNLPCIVDFALTQLRSLNV
SYNILEWFLASGGEATFELETLDLSHNQLLFFPLLPQCSKLHTLLLRDNNMGFYRDLYNT
SSPQQMVAQFLFMDGNVTNISTVNLWEEFSSSDLSDLRFLDMSQNQFQYLPDGFLKKMPS
LSHLNLNQNCLMTLHIREHEPPGALTELDLSQNQLSEVHLAPGLPGCLRSLRSFNLSSNQ
LLGVPTGLFADASNLATIDMSHNQISLCPRPGDLDPGGTPSCVDFRNVASLRSLSLEGCG
LGALQDCSFQGMALTHLDLSGNWGLLNGSIAPLWDIAPTLQVLSLRNVGLSSGFKELDFS
GFGNLRDLDLSGNALTSFPRFRGSLALQTLDLRRNLLTALPQRAVSEQLMGSLRTIYLSQ
NPYDCCGVEDWGALQRLHTVADLAMVTCNLSSRIIRLTELPGGVPQVCKWERVDMGLLYL
VLILPSCLTLLVACTVIFLTFRKPLLQVIKNRCHWSSIY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgctgcacttgagatggagttactgcccctctggctctgcctgggttttcac
ttcttgacagtggaatggaggaatcgaagtggaaatgtcatggccacttcccaagggggc
tgtgagttgctggatggagtcgctgactgtcgagggcagaaccttgcttcagtgcccagc
aatctcccaccatcctcccagacactcctcctggatgccaaccctctcaagaccctgtgg
aaccactcgctgcagcgttaccctctcctggagagcctcagtctgcacagctgccacctg
gagcacatcagccgtggcgccttccaggagcaggctcgcctgtgcagcctggcactgcct
gacaactcactctccgagagctacaaggagacagcagctgctctccatggcctgcggggt
ctgcgcaggctggacctgtcagggaactccctgacggaagacatggcggccctcatgcta
cagaacctctcttcactggagtccgtgtccctggccaggaacaccatcatgaggctggat
gactctgtcttcgagggcctgggccgcctcagggagctggatttgcagaggaactacatc
tttgagattgagggtggtgctttcgacggcttgcctgagctgagacacctcaacctggcc
tataacaaccttccttgcattgtggacttcgccctcacccagctgcggtccctcaacgtc
agctacaacatcctggagtggttcctggcatcggggggagaggccacctttgagctagag
acgctggacctctctcacaatcagctgctgtttttccccctcctgcctcagtgcagcaag
ctgcacaccctcctgctgcgggacaacaacatgggcttctacagggacctgtacaacacc
tcgtcgccgcagcagatggtggcccagttcctcttcatggacggcaacgtgaccaacatc
agcaccgtcaacctctgggaagagttctcttccagtgacctctctgatctccgcttcctg
gatatgagccagaaccagttccagtatctgccggacggtttcctgaagaaaatgccttcc
ctctcccacctgaacctcaaccagaattgcctgatgacgctccacatccgggagcacgag
ccgccaggggcgctcaccgagctggacctgagccagaaccagctgtcggaggtgcacttg
gctccggggctccctggctgcctgaggagcctccggtccttcaacctgagctccaaccag
ctcctgggtgtccccactggcctttttgctgatgccagtaacctcgctacaatcgacatg
agccacaatcagatctcactttgtccccggccgggggacttagaccccgggggcaccccc
agctgtgtggatttcagaaatgtggcctctttgaggagcctgtctctggagggctgtggg
ctgggggcactacaagactgctcgttccagggcatggccctcacccacttagacctgtct
ggtaactgggggcttctgaatgggagcatcgcccctctctgggacattgcccccacgtta
caggtcctgtctctcaggaacgtgggcctcagttccggcttcaaggagttggacttctct
gggtttgggaatctgagggacttggatctgtcgggaaatgccttgaccagtttcccaagg
ttcaggggcagcctggccctgcagaccctggatctccgcagaaacttgctcacagccctt
cctcagagggctgtgtctgagcagctcatgggaagtctgcggaccatctacctcagtcag
aatccgtatgactgctgtggggtggaggactggggggccctgcagcgcctgcacactgtc
gccgacttggccatggtcacttgcaacctctcctccaggatcattcgcctgacggagctg
cccggaggcgttcctcaggtctgtaagtgggagcgggtagacatgggcctgctgtacctc
gtgctcattcttcccagctgcctcaccctgctggtggcctgcactgtcatcttcctcact
ttcaggaagcctctgcttcaggtaatcaagaaccgctgccactggtcctccatatactga
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