Phocoena sinus (vaquita): 116753250
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Entry
116753250 CDS
T07759
Symbol
CLSTN2
Name
(RefSeq) calsyntenin-2 isoform X1
KO
K22660
calsyntenin 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116753250 (CLSTN2)
Cell adhesion molecules [BR:
psiu04515
]
Cadherins
Cadherin related
116753250 (CLSTN2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
TMEM127
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116753250
NCBI-ProteinID:
XP_032486707
Ensembl:
ENSPSNG00000006409
LinkDB
All DBs
Position
4:20835389..21480650
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AA seq
949 aa
AA seq
DB search
MVTGRLCWVPLLLVLGVGSGSGGGGGSRRRRLLASKVNKHKPWIETSYHGVITENNATVI
LDPPLVALDKDAPVPFAGEICAFKIHGQELPFEAVVLNKTSGEGRLRARSPIDCELQKEY
TFIIQAYDCGTGPQETAWKKSHKAVVHIQVKDVNEFAPTFKEPAYKAVVTEGKIYDSILQ
VEAVDEDCSPQYSQICNYEIVTTDVPFAIDRNGNVRNTEKLSYDKQRQYEILVTAYDCGQ
KPSAQDTLVQVDVKPVCKPGWQDWTKRIEYQPGSGSVPLFPSIHLETCDGAVSSIQITTE
LQTNYIGKGCDRETYSEKSLQKLCGASSGIIDLLPSPSAATNWTAGLLVDSSEMIFKFDG
RQGAKIPDGVVPKNLTDQFTVTMWMKHGPSPGVRAEKETILCNSDKTEMNRHHYALYVHN
CRLVFLLRKDFDQADTFRPAEFHWKPDQICDKEWHYYVINVEFPVVTLYMDGATYEPYLV
TNDWPIHPSHIAMQLTVGACWQGGEVTKPRFAQFFHGSLASLTIRPGKMDSQKVVSCLQA
CKEGLDINSLESLGQGIKYHFNPSQSVLVMEGDDIGNINRALQKVSYINSRQFPTVGVRR
LKVSSKVQCFGEDVCISLPDVDAYVMVLQAVEPQITLHGTDRFWRPTAQFESTKGVTLFP
DIKIVSTFTKTEAPGALKTTAPKSAVFEEMLHNLDFCDILVLGGDLDPKQECLELNHSEL
HQRHLDATNSTAGYSIYGVGSMSRYEQVLRHIRYRNWRPAALEARRFRLKCSELNGRYTS
NEFNLEVSVLHEVRVSDKEHVNHLIVQPPFLQSVHHPESQTSIQRSSVVPSIATVVIIIS
VCMLVFVVAMGMYRVRITHQHFTQESEAAKEAEMDWDDSALTITVNPMEKHGAPGRGEDE
TEEEEEEDLSSSSSDSEGSDEEYGVGRGVHGQGGVAQAQLEWDDSTLPY
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgggaggctgtgctgggtaccgctcctgctggtgctgggcgtggggagcggc
agcggcggcggcgggggcagccggcggcgccgcctcctcgcctctaaagtgaacaagcac
aagccatggattgagacttcgtatcacggggtcataacagagaacaacgccacagtcatt
ttggacccaccacttgtcgccctggataaagatgcaccggttccttttgcaggggaaatc
tgtgcattcaagatccatggccaggagctgccctttgaggctgtggtgctcaacaagaca
tcgggagagggccggctccgcgccagaagccccatcgactgtgaactgcagaaggagtac
acgttcatcatccaggcctacgactgtggcacggggccccaggagacggcctggaagaaa
tcgcacaaggccgtggtccatatccaggtgaaggacgtcaatgagtttgctcccaccttc
aaagagccggcctacaaggctgtcgtgacagagggcaagatctacgacagcatcctgcag
gtggaggctgtcgacgaggactgctccccacagtacagccagatttgcaactatgaaatc
gtcacaactgatgtgccttttgccatcgacagaaacggcaacgtcaggaacacggaaaag
ctgagctatgacaagcaacgccagtatgagatcctggtgaccgcctacgactgtggacag
aagccttcagcgcaggacaccctggtgcaggtggacgtaaagccagtttgcaagcctggc
tggcaagattggaccaagaggattgagtaccagcctggctcagggagcgtgcccctgttc
cccagcatccacctggagacgtgcgacggggctgtgtcctccatccagatcaccaccgaa
ctgcagaccaactacattgggaagggctgtgaccgcgagacctactctgagaaatccctt
cagaaattatgtggagcctcctctggcatcatcgacctcttgccgtcccccagcgccgcc
accaactggaccgcaggactgctggtggacagcagcgagatgatcttcaagttcgacggc
aggcagggtgccaagattcctgacggggttgtacccaagaacctgacggatcagttcact
gtcaccatgtggatgaagcacggccccagccctggcgtgagagctgagaaggaaaccatc
ctctgcaactcagataaaaccgaaatgaaccggcaccactacgccctgtacgtgcacaac
tgccgccttgtcttcctcttgcgcaaggatttcgaccaggcagacaccttccgccccgcg
gagttccactggaagccggaccagatttgtgacaaagaatggcattactatgtcatcaat
gtggagtttcctgtggttaccttatacatggatggagcaacgtatgaaccatacctggtg
accaacgattggcccattcatccgtctcacatagccatgcaacttacggtcggcgcttgt
tggcaaggaggagaagtcaccaagcctcgttttgctcaattcttccacggcagcctggcc
agtctcaccatccgccctggcaaaatggacagtcagaaggtggtttcctgcctgcaggcc
tgcaaggaagggctggatatcaattccctggaaagcctgggccaaggaataaagtatcat
ttcaacccctcgcagtctgtcctggtgatggaaggtgacgacattgggaacatcaaccgt
gccctccagaaggtctcctacatcaactccaggcagttcccaaccgtgggtgtgcggcgc
ctgaaagtctcttccaaggtccagtgctttggagaagatgtgtgtatcagcctccccgac
gtggacgcctacgtgatggtgctgcaggccgtcgagccccagatcaccctccatggcaca
gaccgcttctggagacccactgcccagtttgaaagcaccaaaggggttaccctcttcccc
gacatcaagattgtgagcaccttcaccaaaaccgaggcccccggtgccttgaagaccaca
gcccccaaatcagcagtttttgaagaaatgcttcacaacttagatttctgtgacatttta
gtgctgggaggggacttggaccccaaacaggagtgcttggagctcaaccacagtgagctc
caccagcgacacctggacgccaccaactccacggccggctactccatctacggtgtgggc
tccatgagccgctatgagcaggtgctacgtcacatccgctaccgcaactggcgtccagct
gccctggaggcccggcggttcaggctcaagtgctcggaactcaatgggcgctacaccagc
aatgagttcaacttggaggtcagcgtcctccatgaggtcagggtctcagacaaggagcac
gtcaaccacctcatcgtgcagccgcccttcctccagtctgtccaccatccggaatcccag
actagcatccagcgcagttcagtggtcccgagcattgccacagtggtcatcatcatctcc
gtgtgcatgctagtgtttgtcgtggccatgggcatgtaccgggtccggatcacccaccag
cacttcacccaggagtctgaggctgccaaggaagccgagatggattgggacgactcggca
cttactatcacggtcaaccccatggagaaacacggagccccggggcgtggggaagatgag
accgaggaagaggaagaggaagacctaagctcgagcagcagtgactccgagggcagtgac
gaggagtacggggtgggcaggggcgtacacgggcagggcggagtcgcgcaagcgcagctg
gagtgggatgactccaccctcccctactag
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