KEGG   Phocoena sinus (vaquita): 116753250
Entry
116753250         CDS       T07759                                 
Symbol
CLSTN2
Name
(RefSeq) calsyntenin-2 isoform X1
  KO
K22660  calsyntenin 2
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:psiu04515]
    116753250 (CLSTN2)
Cell adhesion molecules [BR:psiu04515]
 Cadherins
  Cadherin related
   116753250 (CLSTN2)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3 TMEM127 Laminin_G_2
Other DBs
NCBI-GeneID: 116753250
NCBI-ProteinID: XP_032486707
Ensembl: ENSPSNG00000006409
LinkDB
Position
4:20835389..21480650
AA seq 949 aa
MVTGRLCWVPLLLVLGVGSGSGGGGGSRRRRLLASKVNKHKPWIETSYHGVITENNATVI
LDPPLVALDKDAPVPFAGEICAFKIHGQELPFEAVVLNKTSGEGRLRARSPIDCELQKEY
TFIIQAYDCGTGPQETAWKKSHKAVVHIQVKDVNEFAPTFKEPAYKAVVTEGKIYDSILQ
VEAVDEDCSPQYSQICNYEIVTTDVPFAIDRNGNVRNTEKLSYDKQRQYEILVTAYDCGQ
KPSAQDTLVQVDVKPVCKPGWQDWTKRIEYQPGSGSVPLFPSIHLETCDGAVSSIQITTE
LQTNYIGKGCDRETYSEKSLQKLCGASSGIIDLLPSPSAATNWTAGLLVDSSEMIFKFDG
RQGAKIPDGVVPKNLTDQFTVTMWMKHGPSPGVRAEKETILCNSDKTEMNRHHYALYVHN
CRLVFLLRKDFDQADTFRPAEFHWKPDQICDKEWHYYVINVEFPVVTLYMDGATYEPYLV
TNDWPIHPSHIAMQLTVGACWQGGEVTKPRFAQFFHGSLASLTIRPGKMDSQKVVSCLQA
CKEGLDINSLESLGQGIKYHFNPSQSVLVMEGDDIGNINRALQKVSYINSRQFPTVGVRR
LKVSSKVQCFGEDVCISLPDVDAYVMVLQAVEPQITLHGTDRFWRPTAQFESTKGVTLFP
DIKIVSTFTKTEAPGALKTTAPKSAVFEEMLHNLDFCDILVLGGDLDPKQECLELNHSEL
HQRHLDATNSTAGYSIYGVGSMSRYEQVLRHIRYRNWRPAALEARRFRLKCSELNGRYTS
NEFNLEVSVLHEVRVSDKEHVNHLIVQPPFLQSVHHPESQTSIQRSSVVPSIATVVIIIS
VCMLVFVVAMGMYRVRITHQHFTQESEAAKEAEMDWDDSALTITVNPMEKHGAPGRGEDE
TEEEEEEDLSSSSSDSEGSDEEYGVGRGVHGQGGVAQAQLEWDDSTLPY
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggtgactgggaggctgtgctgggtaccgctcctgctggtgctgggcgtggggagcggc
agcggcggcggcgggggcagccggcggcgccgcctcctcgcctctaaagtgaacaagcac
aagccatggattgagacttcgtatcacggggtcataacagagaacaacgccacagtcatt
ttggacccaccacttgtcgccctggataaagatgcaccggttccttttgcaggggaaatc
tgtgcattcaagatccatggccaggagctgccctttgaggctgtggtgctcaacaagaca
tcgggagagggccggctccgcgccagaagccccatcgactgtgaactgcagaaggagtac
acgttcatcatccaggcctacgactgtggcacggggccccaggagacggcctggaagaaa
tcgcacaaggccgtggtccatatccaggtgaaggacgtcaatgagtttgctcccaccttc
aaagagccggcctacaaggctgtcgtgacagagggcaagatctacgacagcatcctgcag
gtggaggctgtcgacgaggactgctccccacagtacagccagatttgcaactatgaaatc
gtcacaactgatgtgccttttgccatcgacagaaacggcaacgtcaggaacacggaaaag
ctgagctatgacaagcaacgccagtatgagatcctggtgaccgcctacgactgtggacag
aagccttcagcgcaggacaccctggtgcaggtggacgtaaagccagtttgcaagcctggc
tggcaagattggaccaagaggattgagtaccagcctggctcagggagcgtgcccctgttc
cccagcatccacctggagacgtgcgacggggctgtgtcctccatccagatcaccaccgaa
ctgcagaccaactacattgggaagggctgtgaccgcgagacctactctgagaaatccctt
cagaaattatgtggagcctcctctggcatcatcgacctcttgccgtcccccagcgccgcc
accaactggaccgcaggactgctggtggacagcagcgagatgatcttcaagttcgacggc
aggcagggtgccaagattcctgacggggttgtacccaagaacctgacggatcagttcact
gtcaccatgtggatgaagcacggccccagccctggcgtgagagctgagaaggaaaccatc
ctctgcaactcagataaaaccgaaatgaaccggcaccactacgccctgtacgtgcacaac
tgccgccttgtcttcctcttgcgcaaggatttcgaccaggcagacaccttccgccccgcg
gagttccactggaagccggaccagatttgtgacaaagaatggcattactatgtcatcaat
gtggagtttcctgtggttaccttatacatggatggagcaacgtatgaaccatacctggtg
accaacgattggcccattcatccgtctcacatagccatgcaacttacggtcggcgcttgt
tggcaaggaggagaagtcaccaagcctcgttttgctcaattcttccacggcagcctggcc
agtctcaccatccgccctggcaaaatggacagtcagaaggtggtttcctgcctgcaggcc
tgcaaggaagggctggatatcaattccctggaaagcctgggccaaggaataaagtatcat
ttcaacccctcgcagtctgtcctggtgatggaaggtgacgacattgggaacatcaaccgt
gccctccagaaggtctcctacatcaactccaggcagttcccaaccgtgggtgtgcggcgc
ctgaaagtctcttccaaggtccagtgctttggagaagatgtgtgtatcagcctccccgac
gtggacgcctacgtgatggtgctgcaggccgtcgagccccagatcaccctccatggcaca
gaccgcttctggagacccactgcccagtttgaaagcaccaaaggggttaccctcttcccc
gacatcaagattgtgagcaccttcaccaaaaccgaggcccccggtgccttgaagaccaca
gcccccaaatcagcagtttttgaagaaatgcttcacaacttagatttctgtgacatttta
gtgctgggaggggacttggaccccaaacaggagtgcttggagctcaaccacagtgagctc
caccagcgacacctggacgccaccaactccacggccggctactccatctacggtgtgggc
tccatgagccgctatgagcaggtgctacgtcacatccgctaccgcaactggcgtccagct
gccctggaggcccggcggttcaggctcaagtgctcggaactcaatgggcgctacaccagc
aatgagttcaacttggaggtcagcgtcctccatgaggtcagggtctcagacaaggagcac
gtcaaccacctcatcgtgcagccgcccttcctccagtctgtccaccatccggaatcccag
actagcatccagcgcagttcagtggtcccgagcattgccacagtggtcatcatcatctcc
gtgtgcatgctagtgtttgtcgtggccatgggcatgtaccgggtccggatcacccaccag
cacttcacccaggagtctgaggctgccaaggaagccgagatggattgggacgactcggca
cttactatcacggtcaaccccatggagaaacacggagccccggggcgtggggaagatgag
accgaggaagaggaagaggaagacctaagctcgagcagcagtgactccgagggcagtgac
gaggagtacggggtgggcaggggcgtacacgggcagggcggagtcgcgcaagcgcagctg
gagtgggatgactccaccctcccctactag

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