KEGG   Phocoena sinus (vaquita): 116760003
Entry
116760003         CDS       T07759                                 
Symbol
CD27
Name
(RefSeq) CD27 antigen isoform X1
  KO
K05144  tumor necrosis factor receptor superfamily member 7
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116760003 (CD27)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:psiu04050]
    116760003 (CD27)
   04090 CD molecules [BR:psiu04090]
    116760003 (CD27)
Cytokine receptors [BR:psiu04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   116760003 (CD27)
CD molecules [BR:psiu04090]
 Proteins
  116760003 (CD27)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 116760003
NCBI-ProteinID: XP_032500044
Ensembl: ENSPSNG00000007050
LinkDB
Position
10:complement(96851283..96856045)
AA seq 251 aa
MARPPPCWLWVLGPLAVLSATPASKRCPEKHYLAQGERCCQMCEPGTFLVKECDQHEKAT
QCDPCTPGVSFSPDHHTRPHCESCRHCNSGLLIRNCSLTANSECACPEGWQCRDKECTEC
VGPAQAPGPHPQPSHSPYAEEIPEARTGQYTRTLADSRWLPAPTLSTHWSPQRSLCSTDC
IRIFVLLSGMFLAFTIVGALFLHQQRKYRLNTREGPVAPAEPCPYSCPREEEGSAIPIQE
DYRKPEPASYP
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcccggccacctccctgctggctgtgggttctggggcccctggcagtgctctcagcg
accccagcctccaagaggtgtccggaaaagcattacctggctcagggagaacggtgctgc
cagatgtgcgagccaggaacgttcctggtgaaggaatgtgaccagcatgaaaaggctact
caatgcgatccgtgtacaccgggggtctccttctcaccagaccaccatacccggccccac
tgtgagagctgccggcactgtaactctggtcttctcattcgaaactgctccctcaccgcc
aactcggagtgtgcctgccccgagggctggcagtgcagggacaaggagtgtacagagtgt
gttggtccagcccaggccccaggcccacacccacaaccctcccactcaccttatgctgaa
gagataccagaggccaggacaggccagtatacgcggactctggctgattccaggtggctg
cctgccccaactctctctacccactggtcaccccaaaggtccctgtgcagcacggattgc
atccgcatctttgtgctcctctctggaatgtttcttgctttcaccatagttggagccctg
ttcctccatcaacaaagaaaatatagattaaacacgagagaaggtccagtggcgcctgca
gagccttgtccttacagctgccccagggaggaagagggcagtgccatccccattcaggag
gattaccgaaaaccagagcccgcttcctacccctga

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