Phocoena sinus (vaquita): 116760105
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Entry
116760105 CDS
T07759
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04024
cAMP signaling pathway
psiu04340
Hedgehog signaling pathway
psiu05200
Pathways in cancer
psiu05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116760105 (GLI1)
04024 cAMP signaling pathway
116760105 (GLI1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116760105 (GLI1)
09162 Cancer: specific types
05217 Basal cell carcinoma
116760105 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116760105 (GLI1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
116760105 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
116760105
NCBI-ProteinID:
XP_032500297
Ensembl:
ENSPSNG00000011248
LinkDB
All DBs
Position
10:complement(58398745..58408575)
Genome browser
AA seq
1106 aa
AA seq
DB search
MFNSMTPPPVSSYGEPCCLRPLPSQGAPSLGTEGLPGLPFCHQATLMSGPHSYGPARETS
SCTEAPLFPPPRSAVKLTKKRALSISPLSDASLDLQTVIRTSPSSLVAFINSRCASPGGS
YGHLSIGTMSPSLGFSPQMNHQKGTSPSFGVQPCGPHEPTQGGMMPHPQSRGPLSTCQLK
SELDALLSKRPEEPLEGDMCSPNSTGTQDPLLGMLDGREDLEREEKPEHDSVYETDCRWD
GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP
HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK
PYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPALSTVEPKRERDG
GPIREESRLAVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSS
LDEGPCIAGTGLSTLRRLENLRLDQLHQFRPTGPRGLKLPSLTHTGTPGSRRLGPPVSLD
RRSSSSSSVSSAYTVSRRSSLASPFPPGSPPENGASSLPGLTPAQHYLLRARYASARGGG
TPPTAAPSLDRMGGLPAPPWRSRAEYPGYSPNAGVTRRASDPARSADRPAPARVQRFKSL
GCVHTPPTVAGGGRNFDPQLPTSVYSPQPPSITENVAMDTRGLREEPEVGTSMMGSGLNP
YMDFPPADTLGYGGPEGAAAEPYGARGPGSLPLGPGPPTNYGPNPCPQQVSYPEPTPETW
GEFPSHSGLYPGPKPPAGAYGQCPRLEHYGQVQVKPEQGCPVGSDSTGLAPCLNAHPSEG
PPRSQPLFSHYPQPPPPQYPQSGTYTQPPPAYLPSEPRPSLDFESPTHSTGQLKAQLVCN
YVQSQQELMWEGGGRGDPPVQDPLYQSPKFLGGSQVSLSPAKAQVATYGPGFVPNLPNHK
SGSYPTPSPCHENFAVGANKASHRAAAPPRLLPPLPTCYGPLKAGGTNPSCGHPEVGRLG
GGPALYPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRDSSEHTPPPSGT
PNMAVGNMSVLLGSLPGETQFLNSSA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcgatgaccccaccgccagtcagtagctatggcgagccctgctgtctccgg
cccctccccagtcagggggcccccagcttggggacagaaggactgcctggtctgcccttc
tgccaccaggccaccctcatgtctggcccccacagttatgggccagccagagagaccagc
agctgcacggaggccccactgtttcctcctccccggagtgcagtcaaattgaccaagaag
cgggctctctccatctcacctctgtcagacgccagcctggacctgcagacagttatccgc
acctcacccagctccctcgtggccttcatcaactcacgctgtgcatctccggggggctcc
tatggtcacctctccatcggcaccatgagcccatctctgggattctcaccccagatgaat
caccaaaaagggacctcgccttccttcggggtccagccctgtggtccccatgagcccacc
cagggtgggatgatgccacatcctcagtcccggggacccctctcaacttgccagctgaag
tctgagctggatgcgctgcttagcaagcgcccagaggagcccttggaaggtgatatgtgc
agccccaactccacgggcacacaggatcccctgctggggatgctggatgggcgggaagac
ctggagagagaggagaagcctgagcacgattctgtgtatgagactgactgccgctgggat
ggctgcagtcaggaattcgactcccaggagcagctggtgcatcacatcaacagcgagcac
atccacggagagcggaaggagtttgtgtgccattgggggggctgctccagggagctgagg
cccttcaaagcccagtacatgctggtggtgcacatgcgcagacacacaggcgagaagcca
cataagtgcacgtttgagggatgccggaagtcatactcacgcctggaaaatctgaagaca
catctgcggtcacacacgggtgagaagccatacatgtgtgaacacgagggctgcagtaaa
gccttcagcaatgccagtgaccgagccaagcaccagaatcggacccactccaatgagaag
ccctatgtgtgtaagctccctggctgcaccaaacgttacacagatcccagctcgctccgg
aaacatgtcaagacagtgcatggtcctgacgcccacgtgaccaagcggcaccgaggagat
ggccccctgccccgggcaccagctctttccacagtggagcccaagagggagcgggacgga
ggccccatcagggaggagagcagactggctgtgccggagggtgccatgaagccacagcca
agccctggggcccagtcgtcctgcagcagtgaccactccccagcaggcagcgcagccaat
acagacagtggtgtggaaatgactggaaatgcagggggcagcactgaggacctgtctagc
ttggacgaggggccttgcattgctggcaccggtctgtctactcttcgccgccttgagaac
cttaggctggaccagctacaccaattccgaccaacagggccccggggcctcaaactgccc
agcttgacccacaccggcactcctgggtctcgccgtctgggccccccagtatctcttgac
cgccgcagcagcagctccagcagcgtcagctcagcctatactgtcagccgccgctcctcc
ctggcttcccctttcccccctggttccccaccagagaacggggcatcctctctgcctggc
ctcacgcctgcccagcactacctgctccgggcaagatacgcttcagccaggggaggtggt
accccacccactgcagcacccagcctggatcggatggggggtcttcctgcacctccctgg
agaagccgagccgagtatccaggatacagccccaatgcaggggtcacccggagggccagt
gacccagcccggtctgcagaccgccctgccccagccagagtccagcggttcaagagcttg
ggttgtgtccacacaccccccacagtggcaggaggaggacggaactttgatccccaactc
ccaacctctgtctactccccacagccccccagcatcactgagaatgtcgccatggatacc
agagggctacgggaggagccagaggttgggacctccatgatgggcagtggtctgaacccc
tatatggacttcccgcctgctgatactctgggatatgggggacctgagggggcagcagct
gagccttatggagctagaggtccaggctccctgcctcttgggcctggtccgcctaccaac
tacggccccaacccctgtccccagcaggtctcctatcctgaacccaccccagaaacatgg
ggcgagttcccttcccactctgggttgtacccaggccccaagcctccagctggggcctac
ggccagtgtcctcgtcttgaacattatggacaagtgcaggtgaagccggaacaggggtgt
ccagtgggttctgactccacaggactggcaccctgcctcaatgcccaccccagtgagggg
cctccacgctcacagcctctattctcccactacccccagcctccccctccccagtatccc
cagtcaggcacctatacccagccacctcccgcttatcttccttcagaacccaggcccagc
ctggattttgagtcccctactcattctacaggacagctcaaggcgcagcttgtgtgtaat
tatgttcagtctcaacaggagctgatgtgggagggagggggcaggggagatcccccagtc
caggaccctctctaccagagtcccaagtttctggggggttcccaggttagcctgagccct
gccaaggcacaagtggccacatatggacctggctttgtacctaacttgcccaatcacaag
tcaggctcctatcctaccccttcaccatgccatgaaaattttgcagtaggggcaaacaag
gcttcccatagggcagcagcaccaccccgacttctgcccccactacccacttgctatggg
cccctcaaggcagggggcaccaaccccagctgtggccatcctgaggtgggcaggctggga
gggggcccagccttgtaccctcctcctgaggggcaggtgtgtaaccctctggactctctt
gatctcgacaacactcagctggactttgtggctattctggatgagccccaggggctgagt
cctcccccctcccatgatcagagggacagctctgaacataccccacctccttctgggacc
cccaacatggctgtgggcaacatgagtgtcttactgggatccctgcctggggagacacag
ttcctcaactctagtgcttaa
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