Phocoena sinus (vaquita): 116760781
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Entry
116760781 CDS
T07759
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04010
MAPK signaling pathway
psiu04020
Calcium signaling pathway
psiu04713
Circadian entrainment
psiu04925
Aldosterone synthesis and secretion
psiu04927
Cortisol synthesis and secretion
psiu04929
GnRH secretion
psiu04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116760781 (CACNA1I)
04020 Calcium signaling pathway
116760781 (CACNA1I)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
116760781 (CACNA1I)
04925 Aldosterone synthesis and secretion
116760781 (CACNA1I)
04927 Cortisol synthesis and secretion
116760781 (CACNA1I)
09159 Environmental adaptation
04713 Circadian entrainment
116760781 (CACNA1I)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
116760781 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116760781 (CACNA1I)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116760781 (CACNA1I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116760781
NCBI-ProteinID:
XP_032502050
Ensembl:
ENSPSNG00000008922
LinkDB
All DBs
Position
10:complement(8971564..9025725)
Genome browser
AA seq
2056 aa
AA seq
DB search
MRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLEENFTIQGDVALP
PYYQPEEDDEMPFICSLSGDNGIMGCHEIPPLKEQGRECCLSKDDVYDFGAGRQDLNASG
LCVNWNRYYNVCRTGSANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYN
FIYFILLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASYAEPGDC
YEEIFQYVCHILRKAKRRALGLYQALQRRRQAPGAPGSTKPKPHVKEPRHYELCPRHSPP
DSTLHTLVQPVSAILASDPASCPRCQHEAGRPPSGLGSSNSGQEGSGSGGSGDGEDEAGG
HGARSGEDGASLELEKEDEEGRADGAAWLCGDVWRETRAKLRGIVESKYFNRGIMMAILV
NTISMGIEHHQQPEELTNILEICNVVFTSMFALEMLLKLAAFGLFDYLRNPYNIFDSVIV
IISVWEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLF
IFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNIVLYNGMA
STSPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNMEEFDKLQ
EGLDSGGDPKLCPIPMTPNGHLDPNLPLGGHLGPTGAAASAPRLSLQPDPVLMALGSRKS
SVMSLGRVSYDQRSLSSSRSSYHGPWGRSGAWASRRSSWNSLKHKPPSAEHESLLSAAER
SSGARACEGAREEAPLRAAPPHALHAPHVPHAHQAQHGPHLAHRHCHHRRTLSLDTRDSV
DLAELVPAVGTHPRTAWRAAGPVPGHEDCNGRMPSIAKDVFTKMDDRRDPGEDGEEMDYT
LCFRVRKMIDVYKPDWCEVRKDWSVYLFSPENRFRVLCQTIIAHKLFDYVVLAFIFLNCI
TIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKHSTDGLGGSPPLGPSHWVGLLGL
GKAGCGQLRARCPGAHNPFPVSWRYLLEVQGTAVVSLGLYFGEQAYLRSSWNVLDGFLVF
VSIIDIVVSLASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNI
VLICCAFFVIFGILGVQLFKGKFYHCLGIDTRNITNRSDCVAANYRWVHHKYNFDNLGQA
LMSLFVLASKDGWVNIMYNGLDAVAVDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGV
VVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPTRLLIHSMCTSHYL
DIFITSIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLKLVAFGLRRFFKD
RWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMATGMRALL
DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAFL
TLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVLINVVVAVL
MKHLDDSNKEAQEDAEMDAELELEIAHGLGPGPRPPAGSPGAHVPGCGPGGAGSAGDAEG
HLIRNCYSPAQENLWLDSVSLIIKDSLEGELTIIDNLSGSIFHHYSSPASCEKCHHDKQE
VQLAETEAFSLNSDRSSSILLGDDLSLEDPAACPPGPGDSKGEPDPPEPMRVGDLGECFF
PLSNMAVSSDPENFLCEMESIPFNPVRSWLKHESNQAAPPSPFSPDASNPLLPMPAEFFH
PAVAASQKGQEKAAGAGTLPKIALQGSWASLRLPSVNCTLRQQATGSNTSLEGSRSSSAG
SLQTTLEDSLTLSDSPRRALGPPAPASGLRAGPSPAARRRPSLRGQGQFSLSGLRAHQRS
HSSGGSTSPGCTLHDSMDPSDEEGAGGRAGGGAGSEHSETLSSLSLTSLFGPPPPPPGLP
PARRFSSTSSLAAGPGRPRAAARPQGLARSPSWAADRRKDPPCQADPAAARGPWAPEPQP
PPGEPQPGDAASQGRR
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctggtgaacctgctcctggacacgctgcccatgctggggaatgtcctcctg
ctctgcttctttgtcttcttcatctttggcatcatcggcgtgcagctctgggcgggcctg
ctgcgcaaccgctgcttcctggaggagaacttcacaatacaaggggatgtggccctgccc
ccctactaccagccggaggaggacgacgagatgcccttcatctgctccctgtcgggggac
aacggcatcatgggctgccacgagatccccccgctcaaggagcagggccgcgagtgctgc
ctgtccaaggatgacgtctatgactttggggcggggcgccaggacctcaacgccagtggg
ctctgtgtcaactggaaccgctactacaatgtgtgtcgtacaggcagcgccaacccccac
aagggcgccatcaactttgacaacatcggctatgcctggatcgtcatcttccaggtgatc
accctggaaggctgggtggagatcatgtactacgtgatggatgctcactcgttctacaac
ttcatctattttatcctgcttatcatagtgggctccttcttcatgatcaacctgtgcctc
gttgtcatagcgacccagttctcggagaccaagcagcgggaacaccgtctgatgttggag
cagcggcagcgttacctgtcctccagcacggtggccagctacgccgagcccggcgactgc
tacgaggagatcttccagtacgtctgccacatcctgcgcaaggccaagcgccgggccctg
ggcctctaccaggccctgcagaggcggcgccaggccccgggggcacccggctccaccaag
cccaagccccacgtcaaggagcccaggcactacgagctgtgcccccgacacagccccccg
gactcgacgctccacacgctggtgcagcccgtctctgccattctggcctccgaccccgcc
agctgcccccgctgccagcacgaggcgggccggccgccctcaggcctgggcagcagcaac
tcgggccaggagggctcgggctccgggggctcgggcgacggcgaggacgaggccggtggg
cacggggcccggagcggtgaggatggggcctccttggagctggagaaggaggacgaggag
gggcgggcggacggggctgcctggctgtgcggagacgtgtggcgggagacgcgagccaag
ctgcggggcatcgtggagagcaagtacttcaaccggggcatcatgatggccatcctggtc
aacaccatcagcatgggcattgagcaccaccagcagcccgaggagctgaccaacatcctg
gagatctgcaacgtggtcttcaccagcatgttcgccctggagatgctgctgaagctggct
gccttcgggctctttgactacctgcggaacccctacaacatcttcgacagcgtcattgtc
atcatcagcgtctgggagatcgtggggcaggcggacggcgggctgtcggtgctgcggacc
ttccggctgctgcgggtgctcaagctcgtgcgcttcatgcccgcgctgcggcggcagctc
gtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctgttc
atcttcatcttcagcatccttgggatgcacatctttggctgcaaattcagcctccgcacg
gacacgggagacacagtccctgaccggaagaacttcgactccctgctgtgggccattgtc
acggtgttccagatccttacccaggaggactggaacatcgtcctctacaatggcatggcc
tccacctccccctgggcctccctctacttcgttgccctcatgaccttcggcaactatgtg
ctcttcaacctgctggtggccatcctggtggagggcttccaggcggagggcgacgccaat
cgctcctactcggacgaggaccagagctcatccaacatggaggagtttgacaagctccag
gagggcctggacagtggcggagatcccaagctctgcccaatccccatgacccccaatggg
cacctggaccccaatctcccactgggtggacatctgggccccactggggctgcagcatcc
gccccccgcctctcgctgcagccagaccccgtgctaatggccttgggctcccgcaagagc
agtgtcatgtcactggggagggtgagctacgaccagcgctccctgtccagctctcggagt
tcctatcacgggccgtggggccgcagtggggcctgggccagccgtcgctccagctggaac
agcctcaagcacaagccaccatcggcggagcacgagtccctgctctcggcggcggagcgc
agcagcggtgcccgggcctgcgaaggtgcccgggaggaggcgccactgcgggccgcgccc
ccgcacgccctgcacgccccgcacgtcccgcacgcccaccaagcgcagcatggtccccac
ctggcgcaccgtcactgccaccaccgccggacgctgtccctcgacaccagagattcggtg
gacctggccgagctggtgcccgccgtgggcacccacccacggactgcctggagggcggca
ggcccggtccccgggcacgaggactgcaatggcaggatgcccagcatcgccaaggacgtc
ttcaccaagatggacgaccgccgggatcccggggaggacggagaggagatggactacact
ctgtgcttccgcgtccgcaagatgattgacgtctacaagcctgactggtgcgaagtccgc
aaggactggtctgtctacctcttctcccccgagaacaggttccgcgtcctgtgtcagacc
atcatcgcccacaagctcttcgactatgtcgtcctggccttcatcttcctcaactgcatc
accatcgccctggagcggccccagattgaggccggcagcaccgaacgcatcttcctcact
gtgtccaactacatcttcacagccatctttgtgggcgagatgacactgaagcattccaca
gatggtcttggaggctcacccccacttggtcccagccactgggttgggctcctaggactg
gggaaggcgggatgcggtcagcttcgtgcccgctgcccaggagctcacaacccatttcca
gtgtcgtggaggtacctgctggaggtgcagggcacagcggtggtgtcgctgggcctgtac
ttcggtgagcaggcgtacctgcgcagcagctggaatgtgctggatggcttccttgtcttc
gtgtcaatcatcgacattgtggtgtccctggcctcggccgggggagccaagatcctgggg
gtcctccgggtcctgaggctgctacgcaccctacgacccctgcgtgtcatcagccgggca
cctggcctgaagctggtggtggagacgctcatctcctccctcaagcccatcggcaacatc
gtcctcatctgctgtgcgttcttcgtcatcttcggcatcctgggggtgcagctcttcaag
ggcaagttctaccactgtctgggcatagacacccgcaacatcaccaaccgctccgactgt
gtggccgccaactaccgctgggtccaccacaagtacaacttcgacaatctgggccaggcc
ctgatgtccctctttgtgctggcctccaaggacggctgggtgaacatcatgtacaatgga
ctggacgccgtcgctgtggaccagcagccggtgcccaaccacaacccctggatgctgctc
tacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtc
gtggtggagaacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgc
gaggagaagcggctgcggcgcctggagaagaaacgccggaaggcccagcggctgccctac
tatgccacctactgtcccacgcggctgctcatccattccatgtgcaccagccactacctg
gacatcttcatcacctccatcatctgcctcaatgtggtcaccatgtccctggagcactac
aatcagcccacgtctctggagacagccctcaagtactgcaactacatgttcaccactgtc
tttgtgctggaggctgtgctgaagctggtggcatttggtctgaggcgcttcttcaaggac
cggtggaaccagctggacctggccatcgtgctgctgtcggtaatgggcatcacgctggag
gagatcgagatcaacgcggcgctgcccatcaaccccaccatcatccgcatcatgcgggtc
ctgcgcatcgcccgggtgctgaagctcctgaagatggccacggggatgcgggccctgctg
gacaccgtggtgcaagcgctgccccaggtgggcaacctgggcctcctcttcatgctgctc
ttcttcatctacgctgccctgggagtggagctcttcgggaagctggtctgcaatgacgag
aacccctgtgagggcatgagccggcacgccaccttcgagaacttcggcatggccttcctc
acgctcttccaggtctccactggcgacaactggaacgggatcatgaaggacaccctgcgg
gactgcacccatgacgagcgcagctgcctgagcagcctgcagttcgtgtcgccgctgtac
ttcgtcagcttcgtgctcacggcccagttcgtgctcatcaacgtggtggtggccgtgctc
atgaagcacctggacgacagcaacaaggaggcccaggaggacgctgagatggacgccgag
ctggagctggagattgcccacggcctgggccccggcccgcggccacctgccggctccccg
ggggcacacgtgcctggctgcgggccaggaggggcgggtagcgcgggcgacgccgagggc
cacctgatccgaaactgctattcgccagcccaggagaacctgtggctggacagcgtctct
ttaatcatcaaggactccttggagggggagctgaccatcatcgacaacctgtccggctcc
atcttccaccactactcctcgccggccagctgcgagaagtgtcaccatgacaagcaggag
gtgcagctggccgagacagaggccttctccctgaactcagacaggtcctcgtccatcctg
cttggcgatgacctgagtctggaggaccctgcagcctgcccacccggccccggagacagc
aagggtgagccggacccacctgagccgatgcgggtaggggacctgggtgaatgcttcttc
cccttatccaacatggctgtctcgtcggatccggagaacttcctgtgtgagatggagtcg
atcccattcaaccccgttcggtcctggctgaaacacgagagcaaccaagcagcgccgccg
agccccttctccccggatgcctccaacccactcctgcccatgccggctgagttcttccac
cctgctgtggccgccagccagaaaggacaggagaaggccgctggtgccgggacactcccc
aagattgccctgcagggctcctgggcgtccctgcggttgccaagcgtcaactgcaccctc
cgtcagcaagccacggggagcaacacgtcgctggagggcagccgcagcagctcggcgggc
agcctgcagaccacgctggaggacagcctgaccctgagcgacagcccgcgacgcgccctg
gggccgcccgcgcccgcctcggggctccgcgccggcccgtcgccagccgcccgccgtcgc
ccgagcctgcggggccagggccagttcagcctgagcgggctgcgggcgcatcagcgcagc
cacagcagcgggggctccaccagcccgggctgcaccctgcacgactccatggacccgtcg
gacgaggagggcgcgggcggccgggccggcgggggcgcgggcagcgagcactcggagacg
ctcagcagcctttcgctcacctccctcttcgggccgccgcccccgccgcccggcctcccg
cccgcgcgcaggttcagcagtaccagcagcctggccgccggccccggccgcccccgcgcc
gccgcccggccccaaggcctggcccgcagcccctcctgggccgccgatcgccgcaaggac
ccgccgtgccaggccgatccggccgccgcccggggcccctgggcgcccgagccgcagccg
ccgccgggggagccacagcccggggacgccgcgagccaggggaggagatga
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