Phocoena sinus (vaquita): 116762238
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Entry
116762238 CDS
T07759
Symbol
ITIH3
Name
(RefSeq) inter-alpha-trypsin inhibitor heavy chain H3 isoform X1
KO
K24513
inter-alpha-trypsin inhibitor heavy chain H3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116762238 (ITIH3)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
116762238 (ITIH3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITI_HC_C
VIT
VWA
VWA_3
VWA_2
vWA-TerF-like
AA9
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
116762238
NCBI-ProteinID:
XP_032504897
Ensembl:
ENSPSNG00000004675
LinkDB
All DBs
Position
11:complement(36149833..36163711)
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AA seq
889 aa
AA seq
DB search
MASARWPCLILALLSGVAVSGFPRRLGRLLGKRSLPEGVVDGIEVYGTKVHCKVTSRFAH
NVITTRAVNHADTAKEVSFNVELPKTAFITNFTLTIDGVTYPGNVKEKEVAKKQYEKAVS
QGKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELLKRHKGKYEMYLKVQPKQLVK
HFEITADIFEPQGISTLDAEASFITNDLLSSALTKSFSGKKGHVSFKPSLDQQRSCPTCT
DSLLKGDFIITYDVNRESPANVQIVNGYFVHFFAPQGLPVVPKNVVFVIDVSGSMHGRKM
EQTKDALLKILEDVKEDDYLNFILFSGGVTTWKDTLVQATPENIQEARKFVMNIRDQGMT
NINDALLKGISMLNKAREEYRVLERSTSIVIMLTDGDANVGESRPEKIQENVRNAIGGKF
PLYNLGFGNNLNYNFLERMALENHGLARRIYEDSDANVQLQGFYEEVANPLLTDVEVEYP
ENAILDLTQNSYQHFYDGSEIVVAGRLADEDMNSFKADVKGHGAINDLTFTEELDMKEME
KALKERDYIFGNYIERLWAYLTIEQLLEKCKNAHGEEKENLTAQTLDLSLKYHFVTPLTS
MVVTKPEDNENKTAIADKPGEGPVDAEVIPSMAYLTNSQPPQTPYYVDGDPHFIIQVPEK
DDAICFNIDEEPGTVLRLIQDPVTGLTVNGQIIGEKRSSLDSQTRKTYFGKLGIANAQMD
FQIEVTPERITLWHGAAQSTFSWLDTVTVTEDGLSVTIDRKNMVVSFGDGVTFVVVLHQV
WKKQPIHHDFLGFYVVDSHRMSAQTHGLLGQFFHPFDFKVSDVHPGSDPTKPDATMVVKN
HRLTVTRGSQKDYRKDVSAGTKVACWFVHNNGQGLIDGVNSDYIVPSLF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctcggtggccctgcctcatcttggccctgctctccggtgtggcggtctct
ggcttccctagaagattaggccggctactcgggaaacggagcctcccggaaggggtggtc
gatggcatcgaagtctacggcaccaaggtccactgcaaggtgacctcccgcttcgctcac
aatgtcatcaccaccagggccgtcaaccatgcagacactgccaaggaggtttctttcaat
gtggagctgcccaagacagccttcatcaccaacttcaccttgaccattgatggtgttacc
taccctgggaatgtcaaagagaaggaagttgccaagaagcagtatgaaaaggccgtgtcc
cagggcaagacagctggcttggtcaaggcctctgggaggaagctggagaaattcaccgtc
tcagtcaatgtggctgcaggcagcaaggtcacctttgagctaacctacgaggagctgctg
aagaggcacaagggcaagtacgagatgtacctcaaggtccagcccaagcaactggtcaag
cactttgagatcacagcagacatcttcgagccccagggcataagtacgctggatgctgaa
gcctcattcatcaccaatgacctcttgagcagcgctctcaccaagtccttctcagggaaa
aagggccacgtgtccttcaagcccagcttggatcaacaacgttcatgcccaacctgtacg
gactccctcctcaaaggagattttatcatcacctatgacgtgaacagagagtctccagcc
aatgtgcagatcgtcaatggctacttcgtgcacttctttgcacctcaaggccttccggtg
gtgcccaagaacgtggtcttcgtgattgacgtcagtggctccatgcacggtcggaaaatg
gagcagacaaaggatgccctcctcaaaattctggaggatgtgaaagaggatgactacctg
aatttcatcctgttcagtggaggtgtgaccacttggaaagacactttagttcaagccact
cctgagaacatccaggaggccaggaaatttgtgatgaatattcgtgatcaaggaatgacc
aacatcaacgacgcgctgctgaagggcatcagtatgctgaacaaggcccgggaggagtac
agagtcctggagaggagcacctccattgtcatcatgttgaccgacggggacgccaatgtg
ggtgaaagcagacctgaaaaaatccaagagaatgtgcggaatgccattggtggcaagttc
cccttatataacctgggctttggcaacaatctgaattataacttcctggagcgtatggcc
ctggagaaccacgggcttgcccgccgcatttatgaggattccgatgccaacgtgcagttg
cagggcttctatgaagaggtggccaacccgctgctgacagatgtggaggtggagtaccct
gagaatgccatcctggacctcacccagaacagttaccagcacttctacgacggctctgag
attgtggtggctggacgcctggcagatgaggacatgaacagctttaaggcagacgtgaag
ggccatggggccatcaacgacctgacattcactgaggagctggacatgaaggagatggag
aaggccctgaaggagcgggactacatttttgggaactacattgagcggctctgggcctac
ctcactatcgagcagctgctggagaaatgtaagaatgcccatggcgaggagaaggagaac
ctcacagcccagaccttggacctgtccctcaagtaccacttcgtgactccactgacctcc
atggtggtgaccaagcctgaggacaacgagaacaagacagccattgccgacaaacctggg
gaagggcctgtggatgcagaagtgatcccctccatggcttacctgaccaactcccagcct
ccccagacaccctactacgtggatggggacccccacttcatcatccaagttccagagaag
gacgatgccatctgcttcaacatcgacgaagagccaggcacagtgctgcgcctcattcag
gaccctgtcacaggcctcacagttaacgggcagatcattggtgagaagagaagcagcctg
gactcccagaccagaaaaacttactttggcaagctgggcattgccaatgctcagatggac
ttccagattgaggtgacaccggagaggatcaccctgtggcatggggctgcacagagcacg
ttcagctggctggacacggtcacggtcacagaggatggactgtctgtgacgattgacagg
aagaacatggtggtctcctttggagatggggttacttttgtggttgtcttgcatcaggtg
tggaagaaacagcccatccaccatgacttcctgggcttctatgtagtggacagtcatcgg
atgtcagcacagacacatgggctgctgggacaattcttccacccctttgactttaaagtg
tctgacgtccacccaggctctgaccccacaaagccagatgccacaatggtggtgaagaac
catcggctgacggttacccggggctcccagaaggactacaggaaggacgtcagcgctggc
acaaaagttgcctgctggttcgtccacaacaatgggcaagggctgattgacggcgtcaac
agcgactacattgtccctagcctgttctga
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