KEGG   Pseudomonas sp. JY-Q: AA098_05060
Entry
AA098_05060       CDS       T09824                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
psjy  Pseudomonas sp. JY-Q
Pathway
psjy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psjy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AA098_05060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psjy03019]
    AA098_05060
Enzymes [BR:psjy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AA098_05060
Messenger RNA biogenesis [BR:psjy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AA098_05060
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-ProteinID: ANI32886
UniProt: A0A173HAM7
LinkDB
Position
complement(1143858..1145300)
AA seq 480 aa
MLKALRKIFGKGEAAPQAAAPAASVTPEARPAAKPAAPHANPAPKAEQPAAATPPAEQPA
KDKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSNELMHAIHDLGFPYCTPIQAQ
VLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVV
QIAKDAAALTKYTGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLD
MVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPA
IVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLV
RDGINAAQLSGDVPQHKRIRTLESFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDP
DDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEALLGRKIKCEMPPDELLKPVPRKHH
NT seq 1443 nt   +upstreamnt  +downstreamnt
gtgctcaaagcactcagaaaaatattcggcaagggagaggccgcgccacaagccgccgct
cctgctgccagcgtgacgccggaagcccggcccgcggcaaaaccggccgcaccccatgcc
aaccccgcccccaaggctgagcaacctgccgccgcgacgccacctgccgaacaaccggcc
aaggacaaaccgcgccgcgaacgcaagcccaagccacaggccagcctgtggaagcccgag
gacttcgtggtcgagccacaggaaggcaaaacccgcttccacgacttcaagctgtccaac
gagctgatgcacgccatccacgacctgggcttcccgtactgcacgccaatccaggcgcag
gtcctgggttacaccctgcgtggccaggacgctatcggccgggcccagacgggcaccggc
aagacggccgccttcctgatctcgatcatttcccagttacagcagacgccaccgcctaaa
gagcgctacatgggcgagccgcgcgcgctgatcatcgcccccacccgcgagctggtggtg
cagatcgccaaggacgccgctgccctgaccaagtacaccggcctgaacgtgatgagcttc
gtcggtggcatggacttcgacaagcagctcaaagccctggaagcgcgccactgcgatatc
ctggtggccaccccgggccgcctgctggacttcaaccagcgtggcgaagtgcacctggac
atggtcgaggtgatggtgcttgacgaagccgaccgcatgctcgacatgggcttcatcccc
caggtccgccaaatcattcgtcagacaccgccgaaaagcgagcgccagaccctgctgttc
tccgccaccttcaccgacgatgtgatgaacctggccaagcagtggaccaccaacccggcc
attgtcgagatcgagccggagaacgtggccagcgaaacggtggagcagcacgtgtatgcg
gtggccggcagcgacaagtacaagctgctgtacaacctggtaacccagaacaagtgggaa
cgggtgatggtgttcgccaaccgcaaggacgaagtgcggcgcatcgaggaaaagctggta
cgcgacggtatcaatgccgcccagctgtcgggcgacgtgccgcagcacaagcgcatccga
accctggagagcttccgcgaagggcgcatcaccgtgctggtggccaccgacgtggccggg
cgcgggatccatatcgatggcatcagccacgtgatcaacttcaccctgccggaagaccct
gacgactacgtgcaccgcattggccgtaccggccgtgccggcaccagtggtgtgtcgatc
agctttgccggtgaggatgactcgtatcagctgccggcgatcgaagcgctgctggggcgc
aagatcaagtgcgagatgccgccggatgaactgctaaagccggtgccgcgcaagcatcac
tga

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