Pseudoalteromonas sp. SM9913: PSM_A0090
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Entry
PSM_A0090 CDS
T01374
Name
(GenBank) putative ribosomal RNA pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psm03009
]
PSM_A0090
Enzymes [BR:
psm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PSM_A0090
Ribosome biogenesis [BR:
psm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PSM_A0090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RsgI_N
Ribosom_S12_S23
Motif
Other DBs
NCBI-ProteinID:
ADT67049
LinkDB
All DBs
Position
I:complement(92805..93497)
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AA seq
230 aa
AA seq
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MDTKIRLAKYIAHAGICSRKQASRLIDEGVVIVNNRPANHIDHVDENDRVIVNGHAIKGP
ADLVYFAYHKPVGIDCKLNHHDPSSLIHHLPQLTRVYPIGRLDKDSRGLIILTNDGDFCN
QLIHPDFHQPKRYLVTVNKPLDAHFCEKMAAGVPVDKQITRPCEVVKIASNQFSIVLKQG
LNRQIRKMAHYCGYTVIDLYRVQISELLLDNLNLPENHFIKINKNDILSQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaaattcgacttgctaaatacattgctcatgccggtatttgctcacgaaaa
caagcgtcgcgcttgattgatgaaggcgttgtcatcgttaataatcgccccgctaatcat
attgatcatgtggacgaaaacgaccgtgttatcgttaatggtcacgccattaaaggccca
gccgatttagtgtactttgcctatcacaaaccggtagggattgactgtaaactcaatcat
cacgaccccagcagccttattcatcacctgcctcaacttacccgtgtttaccctattggc
cgccttgataaagattctcgtggtttaattatcttgaccaacgacggagacttttgtaat
caactgattcatccagactttcatcaacctaaacgctacttagtcactgtgaataaacca
ttagacgcgcatttttgtgaaaaaatggcggcaggcgtccccgttgataagcaaataaca
cgaccttgtgaagtagttaaaatagcgagtaatcaatttagtattgttttaaaacaaggg
ctcaacaggcaaatacgtaaaatggcgcattactgtggctacacagtcattgatttatac
cgcgtacagatcagtgaattactattagataatttaaacctcccagaaaaccactttata
aaaattaacaaaaacgatattttaagccaataa
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