Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_17250
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Entry
NIBR502771_17250 CDS
T06121
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psni03016
]
NIBR502771_17250
Enzymes [BR:
psni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NIBR502771_17250
Transfer RNA biogenesis [BR:
psni03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NIBR502771_17250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
PIN_10
Motif
Other DBs
NCBI-ProteinID:
QDG63880
UniProt:
A0A4Y6QU60
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All DBs
Position
3691516..3692850
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AA seq
444 aa
AA seq
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MTPNIPENTTAGVPAAAAAPHITVEGFDSPIPEIIDLDAPRDGVPLVIETQSGLERCAAA
IAAGTGPAGVDAERASGFRYGQRAFLVQIRREGAGTWLIDPEPFGNLDIINDALRGVEWI
LHAASQDLPCLSELGMWPDKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLTELREELIELLQADGKLEYAEQEFAAILEAGIAPPRVDPWR
KTSGLHQIRDRRQLAAVRELWLERDSLAQKRDVAPGRLIPDSALVAAAKAMPATVPQLLG
TKGFHGRAAQREAPRWLRCIAAARDMQELPPLHLATNAPPPPRVWADRDPEAAARLGTAR
PLLQAKAEELNLPLENLLTPDYLRRVAWRPPADVSEDSIAAELRALGARKWQVELTAPLI
SSAFLNPQPLPPKEPKPVAVAGGQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaaacattccggaaaacaccacagccggcgtcccggctgctgctgccgcgccc
cacatcacggtggagggctttgacagtcccatccccgaaatcatcgatctcgacgcaccc
cgggacggcgttcccctggtcatcgaaacccagtccggcctggaacgctgcgccgccgcc
atcgccgccggcaccgggccggccggtgttgacgccgaacgcgcctccgggttccgctac
ggccagcgcgccttcctggtccagatccggcgcgagggcgcagggacctggctgatcgac
cccgaaccgttcgggaacctggacatcatcaacgacgccctgcgcggggtcgaatggatc
ctgcacgctgccagccaggacctcccctgcctgtccgaactcgggatgtggccggacaag
cttttcgataccgaactcgccgcgcgcctggccgggctgccccgggtgggcctggcggcg
gtcatcgaacagctcctgggattcgggcttgccaaggagcactcagcggccgactggtcc
acccgccccctgcccgaaccgtggctccggtacgccgccctggacgtcgaggtcctcacc
gagctgcgtgaggaactcattgagctgctccaggccgacgggaagctggaatatgccgag
caggagtttgccgccatcctcgaagccggcatcgctccgccccgggtggacccctggcgg
aaaacctccggcctgcaccagatccgggaccgccgccaactggctgcggtccgcgaattg
tggctggaacgcgactccctggcgcaaaaacgcgacgtggcgcctggccgcctcattccc
gattcggccctggtggctgccgcgaaggcgatgccggccactgtcccgcagcttctgggc
accaagggattccatggacgcgccgcccagcgcgaggctccgcgctggctgcgctgcatc
gccgctgcacgggacatgcaggaactcccaccgctgcacctggccaccaacgccccaccg
ccgccgagggtctgggcagaccgcgatccggaggcggctgcccgcctgggcacggccagg
cccctgctgcaggcaaaagccgaggagctgaacctgccgctggagaacctgctgacaccc
gattacctgcggcgggtggcgtggcggcctcctgcagacgtcagcgaggactcgattgct
gctgagctgcgggccctcggtgcgcgcaagtggcaggtggaactcaccgccccgctgatc
tccagcgccttcctgaacccgcagccattgccgcccaaggaacccaaacccgtcgcagtg
gccggcggccagtaa
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