Phytophthora sojae: PHYSODRAFT_301896
Help
Entry
PHYSODRAFT_301896 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psoj04131
]
PHYSODRAFT_301896
Membrane trafficking [BR:
psoj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
PHYSODRAFT_301896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
ACBP
ANAPC4_WD40
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
20642079
NCBI-ProteinID:
XP_009529092
JGI:
Physo3_301896
UniProt:
G4ZMJ6
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MFFCSGPPRTYAVARGRERLEDVAVAMHPSQRVLARVTSSRVALWSASLGLAGTGCRLLA
RCRRGGQWIEALEAEDAQDGEEGNDGRLRESASRQLWAAWVSGDRLAVVEKDSQAVEFYA
FDGLHKLLQRAESHDSHAAEDLAVDANAMLDQPSFAEPEQEEADSTAAAIGKGLQLAAKF
VEDYPLNQGASQSDYDDVATSMSAVPGSKYLFVGMASGMISVVEVAESLDGSDGSSSSWF
SAGSDATKIWKIDVRTHLAVPEDAEPPSCYDLTCASADLPSKIASLYLVASFEGGKCFIM
LLSPAQKSIDQLLSLINTERETDATTTSSGNGRCTTTKLDASGSRLALGWSDGGVSLFRL
SLRTAGPIGKAKNVTDDNKEVKTQSALALALEPIRELSLVAWGYTPEDVGSVTALAWSHD
GRSIVVGYELRGFSLFSTDGCRLMSSLPQHNQERPEKIDEHNIKEVCAFGVHTLLWAQES
NSLIVVPRGEQSTQLVQLPEDEILREVEEENNVELTEASNLFETVEARVQKGEDGLCLSL
SGAPGRCGAWVRSDKSFTKPADGGVGPAEACGQIQGGDLLVGINDDLKVVNLPFEQIVSV
IKELPDNEEVALTFMRLKWEDVFPLAVEALSASEFMDAHGIHMLEDENLCIREYALRMQA
LHGDCDLEERPPLMEFERRAKFDGWEAIQGTSTRVAKHKYVKLLFALFPVWNPNHFLNVI
TEYGNAVLAQKLYLAKQKRLRELHAHRELVKMRKRSSMAFAEFDFAKTVPLSGGKSSHLA
LLESKSVRLVAASSLDDPCALTSCVNWSVPTEFEKCCPLRLVALSASGNHMAVAGQRGFC
LLNIVTGKWRMFGNVNDEQDMFVYSLLWVGEDAIVVNFTRFSEKHQSLHLQAYPRNHLDE
ESILEQLVFAREGDNAARSRGAAAVSGGRSIGDDADDCFYIMDSDNAQKNLFCVSRSELW
CFDLKHGGTIKQNDLRMEIQLKRQVNLPSRVVESQPIGTCRRNSILNFAVLPRFLHIQDE
KLREQQQRKYQAEREHEQDDEGWLSSFVNMLVGGEVPDQYTPEEVLPRFAFLDSAGDVIV
WDPENRSQRLLCSNVSTMARLFVTPQACASWPAPCRLIYGLYGPEGMRVWLPLLDGVYMT
HTRAFEQDSRRLETFLACHDPLRAKTYEIEFGTAPATAELYEQVISEYGIALEGFLSSGT
GVGLGTGRMPLKDGYTNMRGCVTSVDDPSAKDGMLRFDFDVKVLGAEQAFGLLVGVSQDV
YVPSGVLLPCYDVFARVQPIFHTLLCFLVQNEQLSWARLVLDGVRKQFALSTPTQELFLH
SMLEACFAKRCPEDKLHTAIQLLRPGEGEQQPEVDIAEYCEIVAHVARKSEPSRLKVLFP
AAGDPMDLLAICQQRSELRTAANFLLILEECSTASGSSLPLRMESAAELLKECVDQEEWV
LAQHVVRVARDWEHPQFDDSSYSHPLPSEDTKHSIDEQLAALVWDNLMRGEYERVVWCVE
DLQAKLPLKSPEERQQEEGSATILDRLYQVFIQGNKRRQLRYGATSYCSVLDSSVRADAV
T
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctgcagcgggcctccgcgcacctacgcggtggcgcgcgggcgcgagcggctg
gaggacgtggcggtggccatgcacccgtcgcagcgcgtgctcgcgcgcgtcacgtcctcg
cgcgtggcgctgtggagcgcgtcgctggggctggcgggcacggggtgtcgtctattggcg
cgctgtcgacgcggcggccagtggatcgaggcgctggaggcggaggacgctcaggacggg
gaggagggcaatgacggacgtctgcgggagagcgcgtcccgccagctgtgggcggcgtgg
gtctccggggaccgcctggccgtcgtggagaaggactcgcaggccgtcgagttctacgcc
ttcgatgggctgcacaagctgctgcagcgcgccgagagccacgacagccacgcggccgag
gaccttgcggtggacgccaacgccatgctggaccagccgtcgttcgccgagccggagcag
gaggaggcggacagcacagcggcggccattggcaaagggcttcaacttgcggccaagttc
gtggaggactacccgctcaaccagggcgcgagtcagagcgactacgacgacgtggccacc
tccatgagcgcggtgcccggcagcaagtacctgttcgtgggcatggccagcggcatgatc
agcgtcgtggaagtggccgagtcgttggacggcagcgacggctcgtcctcctcgtggttc
agcgccggcagcgacgccactaagatctggaagatcgacgtgcgcacccacctggcggtg
cccgaggacgccgagccgccgagctgctacgatctcacgtgcgcgtcagccgacctgccg
tccaagattgcgtcgctgtatctcgtggccagcttcgaaggcggcaagtgcttcatcatg
ctgctgtctccggcacagaagagtatcgaccagctgctgtcactgattaacacagagagg
gagacggatgccacgacgacgtcgtcgggtaatggtcgttgcacgaccaccaagttggac
gccagcggatccaggctcgcactcgggtggtcggacggcggtgtgtcactgtttcggcta
tcgttgagaactgcagggccgattgggaaggcgaaaaatgttacggatgataataaagag
gtcaagacgcagtccgcgctggcgctggcgctggagcccattcgcgagctgagcctcgtg
gcctggggctatacgcccgaagacgtcgggtctgtcacggcgctggcgtggtcgcacgac
ggccggagcatcgtcgtgggctacgagctgcgcgggttctcacttttctccaccgacggc
tgccgactgatgtcgagcttgccgcagcacaaccaggagcgacccgagaagatcgacgag
cacaacatcaaagaagtgtgcgcgttcggggtgcacacgctattgtgggcgcaggagagc
aactcgctgatcgtggtgcctcgtggagagcagtcgacccaactcgtccagctgccggaa
gacgaaattttgcgcgaagttgaagaggagaacaacgtggagctgaccgaggcctcgaat
ctgttcgagacggtggaggccagagtgcagaagggagaagatgggctgtgtctgtcgctg
tctggagcccccggtcgctgtggtgcctgggttcgaagtgacaagagctttacgaagcca
gctgacggcggtgtgggcccagctgaagcgtgcggtcagattcaaggtggagacctgctt
gtagggatcaatgatgacttgaaggtggtcaacctgcctttcgagcagattgtcagcgtg
atcaaggagctgccggacaacgaagaagtggcgcttacattcatgcgtctgaagtgggag
gacgtcttccctctggctgttgaggcgctgtctgcgtccgagttcatggatgcgcacggg
attcacatgctggaagatgagaacttgtgtattcgcgagtacgcgctgcgtatgcaggcg
ctgcatggagactgtgatctggaagagcgcccccctcttatggagtttgagcggcgtgcg
aagtttgacgggtgggaggcgattcagggaacctcaactcgtgtggcgaaacacaagtat
gtgaagctgttgtttgcgctattcccagtgtggaatccgaaccacttcctgaatgtaatc
acggaatacggcaacgcagtgctcgctcagaagctttacctcgcgaagcagaagaggctc
agggaactgcacgcccaccgagaactcgtgaagatgcgcaagcgatcatctatggccttt
gctgaatttgatttcgctaaaaccgtgccgctctctggaggtaaatcgtctcatttggcc
ttgcttgaaagcaagagtgttcgcttggtggctgcgtcctcacttgacgatccatgcgcg
ctgacctcttgcgtgaactggagtgtgccaactgagttcgaaaagtgctgccctctccgc
cttgtggctctgagtgcaagcgggaatcacatggcagtggctggccaaagaggcttttgc
ttgctgaatattgtgacaggaaagtggcggatgttcggcaacgtgaacgatgagcaggac
atgttcgtgtattcgctgctgtgggtgggcgaagacgcgattgtggtgaacttcacgcga
tttagtgagaagcaccagtcgctgcacttgcaggcgtatcctaggaatcatctggatgag
gaatcgattttggagcagttggtgttcgcgcgtgaaggcgataacgccgcgcgtagtcga
ggagcagcagcagtatcaggcgggcgctctatcggggacgacgctgacgactgtttctac
atcatggatagtgacaacgcgcagaagaatctgttttgcgtgtcgaggagtgaattatgg
tgctttgacctcaagcacgggggcaccattaagcagaacgacctcagaatggagattcag
ctcaagcgccaagtcaatttgccgtcacgggtagtggagtcccagcccattggaacgtgc
aggcgaaacagcattctgaatttcgcggtgctgccgcgattcttacatattcaggatgaa
aagttgagagagcaacagcagcgtaagtatcaagcagagcgcgagcacgagcaggacgat
gaaggttggctatcgagcttcgtgaacatgctcgtggggggcgaagttcccgaccagtac
acaccggaagaagtactgccgcgattcgcattcctcgacagtgcaggtgatgtgattgtg
tgggatccagagaatcggtcgcaacgattattgtgttccaacgtgagtacaatggccaga
ctattcgtgacgccacaggcctgcgcgtcatggccagctccctgccgactcatttacgga
ttgtacggtcctgaaggcatgagggtgtggctaccgttgttagacggtgtatatatgacg
cacaccagggcttttgagcaggacagtcgtcggctggagactttcttggcttgccatgat
cctttacgagcgaaaacgtacgagattgagtttggtacagcacctgccaccgctgaattg
tacgagcaagttatcagcgagtacgggatcgcgttggaaggcttcctgtccagtggaact
ggtgttggcttgggtactggtagaatgcccctcaaggacgggtataccaacatgcgtgga
tgcgtgacgtcggtggacgatccgtctgcgaaggatggcatgctgcggtttgacttcgac
gtgaaggtgcttggtgctgaacaagcatttggactgctggtcggtgtatcacaagatgtg
tacgtgccttcgggcgtgctgctcccgtgctacgacgtgtttgctcgtgtgcagcccatt
ttccacacgttgctgtgcttccttgtccagaacgagcagctttcgtgggcgcgtctggtg
ttggatggcgtccgcaagcagtttgccttgtctactcctacgcaggagcttttccttcac
tccatgctggaagcgtgcttcgcgaagcggtgtccagaggacaaactacacactgctatc
cagctactgcgtcctggggaaggagagcagcaaccggaggttgatatcgcggagtactgc
gagattgtagcgcacgtggcgcgtaagagcgagccatcacgcctgaaggtgctgttccct
gctgcaggggaccccatggatctactcgcgatctgccaacaacgatcagagctacgcacg
gctgcgaacttcttgctcatcttggaggagtgttcaacggcgtcaggttcatcgctgcct
ctgcgaatggagagtgccgctgagctgctgaaggagtgcgtagatcaagaagagtgggtg
ctcgcgcagcacgtcgtacgcgtcgcgcgcgattgggagcacccacagttcgatgattcg
tcgtactctcacccgctcccttccgaggacaccaagcatagcattgatgaacagctcgca
gctctggtttgggataacctcatgcgcggcgagtatgagcgcgtggtgtggtgtgtcgag
gatctgcaggcgaagctgccgctcaagtcacctgaagagcggcagcaggaggagggcagc
gcaactattctagaccggctgtaccaggtcttcatccagggcaacaagcggagacagctc
aggtatggagcaaccagctattgttctgtgttggatagtagcgtgcgtgctgacgctgtg
acttga
DBGET
integrated database retrieval system
