Papaver somniferum (opium poppy): 113276248
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Entry
113276248 CDS
T05758
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113276248
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113276248
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113276248
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
113276248
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113276248
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113276248
Prokaryotic type
113276248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
AAA_23
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
113276248
NCBI-ProteinID:
XP_026381611
LinkDB
All DBs
Position
4:105401843..105410101
Genome browser
AA seq
1102 aa
AA seq
DB search
MLRHFLGLGFKSRTKLISSRSQFTETRWWSSSSSKIVTNMEENKIDLKKEPEIPKVETAE
ELERKKKKEEKAKEKELKKLKALEKAAAAKNQAQKAAAASKKSEKKVAKKEAVEENLEDY
VDPATNPGEKKHLSRQMAKQYSPAAVEKSWYAWWEKSGYFIADANSTKPAFTIVLPPPNV
TGALHIGHALTAAIQDTICRWRRMSGFNVCWVPGMDHAGIATQVVVEKKIMRDSKRTRHD
IGREDFVKEVWKWKNEHENTILNQERRIGVSLDWSRECFTMDEPRSKAVTEAFVRLYKDR
LIYRDNRLVNWDCVLRTAISDIEVDYKDIKERTLLKVPGYDTPVEFGVLTSFAYPLEGEL
GEIVVATTRVETMLGDTAIAVHPEDERYTHLHGKYAIHPFNGRRLPIICDGILVDPQFGT
GAVKITPAHDPNDFEVGKRHNLEFINILTNEGLINSNGGSAFKGMPRFEARVAVIEALKK
KDLYKGAQNNEMRLGVCSRTNDVVEPMIKPQWYVNCNGMAKQALDAVVDEKCKKIEIIPK
QYTAEWRRWLENIRDWCISRQLWWGHRVPAWYVTLEDDQLQEYGVYADHWVVGRNEEEAL
SEANKISGGKKFQMTQDPDVLDTWFSSGLFPLSVLGWPDNTADFRAFYPTSVLETGHDIL
FFWVARMVMLGMQLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLENLH
KRLEEGNLDPNELVVAKEGQVKDFPNGIAECGADALRFALVSYTAQSDKINLDIQRVVGY
RQWCNKLWNAIRFAMTKLGDNYVPPAKLNPDSLPFSCKWILSVLNKAISKTVAALESYEF
SDASTAVYSWWQFQLCDIFIEAIKPYFVGDDKFNDERSAARDTLWICLDNGLRLLHPFMP
YVTEELWQRLPQVAGNCAKKESIMISEYPSVVKEWTNEAVESEMDLVETLVKSIRSIRAN
LPPNERLGRKPAFVVCRSDAVGDVIRSRELEISTLASLSSFEIVAENDANLATCLVNVAN
EHFSTYLQQAQGSLNAEAEREKLMKRKDDIQKQRDTLQQKMNSIGYEVKVPEHIRAENDK
KLAKLLQELKIVEDACEILEQP
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgttgagacattttcttggtttagggttcaaatcgagaacgaaattaatcagttctaga
agtcaatttacagaaacacggtggtggtcttcttcttcatctaaaattgtaacaaacatg
gaagaaaacaagatagatttgaagaaggaaccggagattccaaaggttgagacagctgaa
gaacttgagaggaagaagaagaaagaagagaaggctaaggagaaagaattgaagaagtta
aaggcgttggagaaagcagcagcggcgaaaaaccaggcacagaaggctgctgctgctagt
aagaaaagtgagaagaaagttgctaagaaagaagctgtggaagaaaatcttgaggattat
gttgaccctgcaactaatcctggagagaagaaacatctttcccgtcaaatggcaaagcag
tatagtccagctgcggtggaaaaatcgtggtatgcatggtgggagaaatcaggttatttt
attgcagatgctaacagtactaaacctgccttcacaattgtactcccacccccgaatgtg
actggggccctacacattggccatgctctaactgctgctattcaggatacaatttgtcgt
tggaggagaatgtctggcttcaacgtttgttgggtcccagggatggatcatgctggcata
gcgacacaggttgttgtggagaaaaagataatgcgtgatagcaaaagaacaaggcatgat
attggtcgtgaagattttgtgaaagaagtatggaaatggaagaatgagcatgaaaataca
atattaaatcaggaacggcggataggtgtctctctcgactggtctcgtgagtgctttaca
atggacgagccaagatcgaaggctgtgactgaagcttttgttcgcctttataaagatcgt
ctcatatatagggataaccgacttgtgaactgggattgcgtcttgcggacggctatatct
gatatcgaagtggattacaaagacataaaggaaagaacgctgttaaaggttcccggttat
gataccccagtagagtttggtgtacttacatcttttgcttaccctttggagggggagttg
ggcgagatagttgttgccacaactagagtggagacaatgttaggtgatactgccatagct
gtccatcctgaagacgagaggtacactcatcttcatggaaagtatgcaattcatccattc
aatggaaggagactgcccattatttgtgatggaatacttgtcgatccacaatttgggaca
ggtgctgttaagatcacacctgctcatgatccaaatgattttgaagttgggaaacgtcat
aatctggaatttatcaacatcttgaccaatgaaggattaattaacagcaatggtgggtca
gcttttaagggcatgccacggtttgaagctcgtgtagctgttattgaggcactaaagaag
aaggatctctataaaggtgctcagaataacgagatgcgtcttggtgtttgttcaaggact
aacgatgttgtggaaccgatgattaagccccaatggtatgttaattgtaatggtatggca
aagcaagctctcgatgctgtcgtggatgagaagtgtaagaaaattgaaatcattccaaag
cagtatactgctgagtggagaaggtggctggaaaacatccgagattggtgcatctcaagg
caactgtggtggggacaccgtgttccagcatggtatgttacactggaggatgaccagtta
caagaatatggtgtgtatgctgatcattgggtggttgggagaaatgaagaggaagctcta
tccgaggctaataaaatctctggtggaaagaagtttcagatgactcaagatccggatgta
ttggacacttggttttcctctggattgtttccgttatctgtgctgggatggcctgataat
actgctgattttagagcattttatccaacttcagttcttgaaactggacatgacattctc
ttcttttgggtagcacgcatggtcatgctaggaatgcagctcggtggtgatgtacctttc
agaaaggtttacttgcatccaatgattcgtgatgcacacggtcgtaaaatgtcaaaatct
ttgggaaatgtgattgatccacttgaagtaataaatggggtaaccttggaaaacctgcac
aaaaggctggaagagggtaacctggatcctaatgagctagttgttgccaaagagggacaa
gtgaaagacttccctaatggcattgctgaatgtggtgcagatgcgctgcggttcgccctt
gtctcttatacagctcagtcggataagataaatttggatatccaaagagttgttggttat
agacaatggtgcaacaaactatggaatgccattcgctttgcaatgaccaagctcggcgac
aattacgttcctcccgcgaaactaaatccagactctcttccattcagctgcaagtggata
ctgtcagtgttgaacaaagccatatccaagacagttgcagccctcgagtcttacgagttt
tctgatgcttccacagcagtatattcatggtggcaattccaattatgtgatatattcatc
gaagcaattaaaccttactttgtgggggatgataagtttaatgatgaacggagtgctgca
cgtgatactctgtggatttgtttggacaatggtttgcggttgctccacccatttatgcca
tatgttactgaagaattgtggcagcgtcttcctcaagtagccggaaactgtgccaagaag
gaatcaatcatgatttccgagtacccgtcagttgtaaaggagtggacaaatgaagcagtt
gaaagtgagatggatctggttgaaactcttgtgaagtcaattagatctatccgtgctaat
ttacctccaaatgaaaggctaggaaggaaaccagcttttgtggtttgccggtcggacgct
gttggagatgttatcagaagccgtgaacttgagatatcaactcttgcttcattgtcatct
tttgagattgtggctgagaatgatgctaaccttgcaacatgtcttgttaatgttgcaaac
gagcacttctcaacttatctacaacaggcccaaggatcgcttaatgcagaagctgaacgg
gaaaaactaatgaaaaggaaggatgatatacaaaagcaaagagatactttgcaacaaaag
atgaactctataggttatgaagttaaggttccagagcatattcgcgcagaaaatgataag
aagctagccaaattgttgcaagagctgaagattgtcgaagatgcatgtgagattttagaa
caaccttga
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