Papaver somniferum (opium poppy): 113276291
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Entry
113276291 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113276291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113276291
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113276291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
SET_assoc
Nup35_RRM
DUF2129
Motif
Other DBs
NCBI-GeneID:
113276291
NCBI-ProteinID:
XP_026381659
LinkDB
All DBs
Position
4:107756619..107759941
Genome browser
AA seq
366 aa
AA seq
DB search
MRPIFCGNFEYDARQNDLERLFNKYGKVERVDMKSGFAFVYMDDERDAEDAIRGLDRAEF
GRQGRRLRVEWTKQERGIRRPAGSRRSSANSKPTKTLFVINFDPIHTRTRDLERHFDAYG
KILNIRIRRNFAFIQFESQDDATKALEATNMSKLMDRVISVEYAVRDDDERRDGHSPDRR
GGRDRSRERGRSPSPYRRDRGSPDYGRAPSPDRRRGSRDSPYRRERASPDYGRGPKESPY
RRDKGSPDYGRGRSPSPVRRRSSRDSPYAREKVVSPGYDRGSLSPVKKRERKDSPACSPS
MSPSKKRGRRDSPYGRERAASPGYRRDPSRSPVRKDETNGSPNGKAESPAYERHRSRSPV
EDRERS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctatattctgtggtaatttcgagtatgatgcacgccagaatgatcttgagaga
cttttcaacaagtatggaaaggttgagcgggttgatatgaagtctggatttgcgtttgtg
tatatggatgatgaacgagatgctgaggatgcaataagaggactggaccgtgcagaattc
ggtagacaaggtcgtcgacttcgcgttgagtggacaaagcaagaaagaggtattaggagg
cctgcaggctcaaggagatcctctgccaattcaaagccaacaaaaaccttgtttgttatt
aactttgatcctattcacactagaacaagggatttggagaggcactttgatgcatatggg
aagatcttgaatataagaattcgaaggaattttgcattcattcagtttgaatcacaggat
gatgccaccaaagctttggaggcaacaaacatgagcaagttgatggatcgagttatttcg
gtggaatatgctgttagagatgatgatgaaagaagagacggccacagccctgaccgaagg
ggtggtagagatagatcacgtgaacgtgggagatctcctagtccttacaggagggataga
ggcagtcctgattacggccgtgctcctagcccagatagaaggcgtgggtcgagagacagc
ccttacagaagagagagagccagtccagactatggtcgtggaccaaaggagagtccatac
cgcagagacaagggaagtcctgactatgggcgtggccgaagtccaagtccagttaggagg
cgttcatcaagggatagtccttatgcaagagaaaaggttgttagtcctggttatgatcgt
ggaagcctgagcccagtcaagaagcgtgagagaaaggatagccctgcttgtagcccaagc
atgagcccaagcaagaagcgtggacgaagggatagtccatatggaagagagagagcggct
agccctgggtatcgtcgtgaccctagtcgaagccctgtaagaaaggatgagacaaatgga
agtcctaatggcaaagctgaaagtccagcatatgagagacatcgcagtcggtcacccgtg
gaagatcgtgaaagatcatga
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integrated database retrieval system
