Papaver somniferum (opium poppy): 113287932
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Entry
113287932 CDS
T05758
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4-like isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113287932
Enzymes [BR:
psom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
113287932
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113287932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
MTS
TRM
DNA_methylase
PrmA
Methyltransf_15
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
113287932
NCBI-ProteinID:
XP_026392604
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Position
6:70740195..70745769
Genome browser
AA seq
1045 aa
AA seq
DB search
MEFEKRKASTLAEMASTEIDKSPKGTIDEPIIPLLKTLNLHPSYFSTSSCSGRISILSQP
PPSITNTSKKKAKGGSWILISHEPVDPDSVINLLFPDSTTIQTTQEEGELVFRFEPFILA
VECKDISSAQSLVSTAISCGFRESGITSVQKRVIIAIRCSIRLEVPIGSIGKILVSPDYV
RFLVKTANDKMELNRKRTDGFLLVLESKFLCNRDCGNEDEEMMDNCQERNSENFELAESI
VDGGANSGEAGLDDHSGLPRDTPCSISVSKMTITGEPVDKLFVWGHSMCALNNIHLNEVL
VFGGFGGVGRHARRNDTLILDTQTGNLKAINIDGSPSPRLGHTSLVVGECIFVIGGREDP
TKILDEVWVLNTAKSEWRLLECTGSTFHPRHRHAAAVVGSNIYVFGGLNNETIYSSMHVL
DVEKLQWSEVSIQGELPSARHSHSMVSNGFQLLMFGGYDGEKALGDLYSFDTKTSMWMKK
KTAGRTPSPRFSHSMFVYKHFLGIVGGCPVKQHFEEVALLDLHLGLWKHVTLNSVGKDLL
VRSTVNVVGDDLVIVGGGASCYAFGTKFSEPMKMSLLPFTSSHGSIMSSDTEQYRVKQGN
KVVTESNNSNPLGTSSDVQISDKASNLIDNAEAHASSKHWVLQLERKYAKLAKDMVKKFG
WLDLGRKVYSCEDGLHICLPVTIKFYTLFVNKRKQALIDGIDFIDGVHPSEPAKDERISI
NDVSCPAALNLLLVYGGSIVIDEVASIRKTPKSPQKIMVEAVGSLINHRGLPENLLEQIP
TRWERLGDIVVLPVTSFKDQLWESLGEELWLTIAKAIGTRRLARQGRIVLTGTRDSTLEI
LVGDSGWVDHRENGILYSFDVTKCMFSWGNLSEKLRVARLDCKDEVIVDLFAGIGYFVLP
FLVGAKAKQVYACEWNPHAIEALRRNVQLNSVADRCIILEGDNQVTTPKRVADRVSLGLL
PTSEASWITAVRALRIEGGMLHVHGNVKDSEETSWSEYVAKSISDIGISEGNHWKVSVQH
IERVKWYGPHIRHLVADVRCTQLQM
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaagagaaaagcatccacacttgcagaaatggcttcgactgagatcgac
aaatcacccaaaggaacaatagacgaacctataattccacttctcaaaaccctaaatttg
cacccttcttacttcagtaccagttcttgttctggtcgtatttcaattctctcacaacct
cctcccagcattaccaacaccagtaagaagaaagctaaagggggttcatggattctaatt
tcccatgaaccagttgatcctgactcagttattaaccttctcttcccagactcaacaacc
attcagactactcaagaagaaggtgaacttgttttcaggtttgagccttttatacttgct
gttgaatgtaaagatatatcatcagctcaatcacttgtttcaacggcgatatcttgtgga
tttagagaatcaggtattactagtgttcaaaaacgtgtgattattgctattagatgttca
attaggttagaagttcctataggttcaattgggaagatattagtttctcctgattatgtt
aggtttcttgttaagactgctaatgataaaatggaacttaatagaaagagaactgatggg
tttttactggtgttggagagcaagtttttgtgtaatcgagattgtgggaatgaagatgaa
gagatgatggataattgccaggaaaggaattctgagaattttgagttggctgaatccata
gttgatggtggtgccaattctggggaagcaggacttgatgatcattcaggattaccgaga
gatactccttgcagcatttctgtttccaagatgacaattactggagaaccagttgacaag
ctttttgtatggggtcactccatgtgtgctctaaataacatacacctgaatgaagttctg
gtatttggtggttttggtggtgtaggaagacatgctcgaagaaacgatactctaattctg
gatacccaaactggtaatttgaaggcaataaacattgatggatctccttctccacgcttg
ggtcacacatctttggtagttggggaatgtatttttgttattggaggaagggaagatcct
acaaaaattcttgatgaggtgtgggtcttaaatacagctaagagcgaatggagattgctg
gagtgtacaggcagtacgttccatcctaggcaccgtcatgcagctgcagttgtaggttca
aacatatatgtatttggtggtcttaacaatgaaacaatatattcttccatgcatgttttg
gatgtggaaaaactgcagtggagtgaggtaagcatccagggggaactaccatctgctcgt
cattcccattcaatggtctcaaatgggtttcagttgttaatgtttggtggatatgatggt
gaaaaagcattaggagacctttacagttttgacactaaaacaagcatgtggatgaagaag
aagacagcagggagaaccccatcacccaggttctctcattctatgtttgtctataagcat
tttcttggcattgttgggggatgtcctgtcaagcaacattttgaagaggtcgcactactt
gatttgcatcttggtttatggaagcatgtgacactgaattctgtcggcaaggacctcctt
gttcgtagtacagttaatgttgtcggtgatgatcttgttatcgtcggtggtggggcatca
tgttatgcatttgggacaaagtttagtgagccaatgaaaatgagcttgctaccatttaca
tcttcacatggtagtattatgagttccgatacagagcaataccgtgtgaaacaagggaat
aaagtagtaacagagagtaataacagtaacccactaggcacaagtagtgatgtacagatt
tcggacaaagcttctaatttaatcgacaatgctgaagcacacgctagttctaaacactgg
gttcttcagctcgaaagaaaatatgctaagttagcgaaggacatggtaaaaaagtttggg
tggctagatcttggaagaaaggtttattcttgtgaagatggccttcatatttgtttacct
gttactataaagttctatactttatttgttaacaaaagaaagcaggctttgatagatgga
attgattttattgatggcgttcatccttcggaaccagctaaggatgagaggatatccata
aatgatgtttcttgtccagctgcattaaatcttctgttggtatatggtggctctatagtt
atagatgaagtagctagtatccgaaaaacaccaaaatctccccagaagataatggttgaa
gctgttggttctttgataaatcacagggggttaccagagaacttgctggagcagatacct
acaagatgggaacgactgggggatattgtggtacttccagttacatcattcaaggatcaa
ctgtgggagtcactgggggaggagctttggcttacaattgctaaagcaattggtacacgt
cgccttgctcgtcaaggtcgaattgttctaactggaacaagggatagtactttggagatc
cttgtgggagacagtggttgggtagatcatcgtgaaaacggaatcctgtattcttttgat
gtgactaagtgcatgttttcgtggggaaatctttcggagaagcttcgtgtggctcgtctg
gactgcaaggatgaagttattgtggacctgtttgctggaattggatactttgtgctgcca
tttctcgttggagccaaggcaaaacaggtttatgcctgcgagtggaatccccatgctatt
gaagccctacggcgtaatgttcaattaaattcagtggccgatcggtgtatcatactcgag
ggagataaccaggtcacaacacctaaaagggttgctgaccgtgtcagtcttggtttactg
cctactagtgaggcgagttggattactgctgttagggcattgaggatcgaaggagggatg
ttgcatgtccatgggaatgtgaaggattcggaggagacttcttggtcagaatacgtagca
aagtcaattagtgacattggtatttccgaaggtaaccattggaaggtttcagtgcaacac
atcgagagagtgaaatggtatggacctcacatccgccatcttgttgcagatgtaagatgt
acacaacttcagatgtag
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