Papaver somniferum (opium poppy): 113297896
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Entry
113297896 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MSH4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113297896
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113297896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
113297896
NCBI-ProteinID:
XP_026402255
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Position
7:complement(95261118..95268205)
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AA seq
797 aa
AA seq
DB search
MEDEVEGGVGGERSSFVISLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLH
FYDAMVIIVPSNKFAPDGMIGVSELVDKFYSTTKKVVVARGCFDDTKGALLVKSLAAKEP
SALGLDTYYKQYYLCLAAAAATIKWIEAEKGVIVTNHSLMVTFNGSFDHVNIDATSAQNL
EIIEPLNSSLWGTSNKKRSVFHMLKTTRTIGGTRLLRANLLQPLKDIETINARLDCLDEL
MSNEELFFGLTQVLRKFPKETDRVLCHFCFKPKKVTNQVLSYDTSKKSQVLISSIILLKT
ALEALPLLSKVLKDAKSFVLGNIYKSICENGKYASIRKSICDVIDEDVLHARVPFVARTQ
QCFAVKAGIDGLLDVARRSFCDTSEAMHNLANKYREDFHLPNLKIPFNNRQGFYFSIPRR
DINGNLPGKFIQLLKHGNNIHCSTLELASLNVRNKSAAAECYVRTELCLEGLVDAIRKDV
SVLTVLAEVLCLLDMLVNSFAHTISTKPVDRYTRPEFTENGPYAIDSGRHPILESIHNDF
IPNNIFLSEASNMVIVMGPNMSGKSTYLQQICLIVILAQIGCYVPARFASLRVVDRIFTR
MGTGDSLECNSSTFMTEMRETSFVMQNVSPRSLIVMDELGRATSSADGFAIAWSCCEHLV
SLKVYTIFATHMENLSELSTIYPNVKILHFDVDVKNNRLDFKFQLKDGIRHVPHYGLLLA
GIAGLPSSVIETARSITSKITEKEARRMEVNCMEYNSIQMVYRIAQRLICLKYSSQDEDS
IREALQNLKESYIEEKL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaagtagaaggtggagttggaggagagagatctagctttgttatcagtctc
attgaaaatcgcgccaaagaggtaggagtggcggcatttgatttgagatcggcatcattg
catctttctcagtatatagaaaccagtagttcatatcagaacaccaaaacactattgcat
ttttatgatgctatggttataattgtcccctcaaacaagttcgctcctgatggtatgatt
ggggtttctgaattggtggataaattttattctacaactaagaaggttgttgtggcgcgt
ggttgtttcgatgacacgaagggtgctttgttggttaaaagcttagcagcgaaagagccg
tcggcacttggtttggatacatactataaacaatattatctatgcttagctgctgcggct
gctacgatcaaatggatagaggcagagaaaggagttattgttacaaaccactcattgatg
gttaccttcaatggctcatttgaccatgtgaatattgatgctactagtgctcagaacttg
gagataattgagccattaaattcgtcactttggggcacaagcaacaaaaagaggagtgta
tttcatatgctcaagacaacaagaactattggggggactagacttcttcgggcaaatctt
ttgcagcctttgaaagatatcgagaccatcaatgctcgacttgactgcttggatgaattg
atgagcaatgaggagctattctttggacttactcaagttcttcgtaaatttccgaaggaa
actgatagggttctctgtcatttttgcttcaagccaaagaaagttacaaatcaggtgctg
agctatgatacttcgaagaagagtcaagtgctgatatcaagcatcattcttcttaaaacc
gcgttagaggccttgccattactatcaaaggtgctcaaggatgcaaaaagttttgttctt
ggaaatatttacaagtcgatctgtgaaaatggaaaatatgcgtccatacggaaaagtata
tgtgatgtcattgatgaagatgtacttcatgcccgagttccttttgttgcccgcacacaa
caatgtttcgctgtcaaggccggaatagatgggcttctggatgttgcacgtcgatccttt
tgtgatactagcgaagcgatgcataacctagcaaacaaatatcgtgaagatttccatctg
ccaaatttgaaaattcctttcaacaacaggcaaggattttacttcagcattccgcggagg
gacataaatggaaatctccctggaaaatttattcagctcttgaaacacgggaacaacatc
cattgctcgactcttgaacttgcttctttgaatgttcgaaacaagtctgcagcagcagag
tgctatgtacggacagaactatgcctggaaggattagtagatgccatcaggaaagatgtt
tctgttcttacagtacttgcagaagtgttatgtcttttggacatgcttgtgaattcattt
gcccatacaatatccactaagcctgttgatcgatacactaggccagaatttacagagaac
ggcccatatgcgatagattctggaaggcatcccatcctggaaagcatacacaatgatttc
attcccaacaatattttcctttctgaagcatctaacatggtgatcgtcatgggaccaaac
atgagcgggaaaagtacttatctccaacaaatttgccttatagtcattcttgcacaaatt
ggttgctatgttcctgcccgttttgcatctctgagagtggttgaccgcatatttacacgg
atgggaacaggggatagcctcgaatgcaactctagcacgtttatgacagaaatgagagag
acgtctttcgtaatgcaaaatgtctctccaaggagtctgattgttatggatgaacttggg
cgtgctacatcgtctgctgatggatttgccattgcgtggagctgttgtgagcatctagta
tcattgaaagtatatactatatttgccactcacatggaaaacctatccgagttatcaacc
atttacccaaatgtgaagattctccatttcgacgtcgatgtcaaaaacaaccgcttagat
ttcaagtttcaactcaaggatggcatcagacatgtgccacactatggactcttactggct
ggaattgcagggttgcccagctctgtgattgaaactgcaagaagcatcacatcaaagata
acagaaaaggaagcaaggaggatggaagttaactgcatggagtataattcgatccagatg
gtgtatcgaattgctcaaagacttatttgcttgaaatactccagccaagatgaggattct
atccgagaagcattgcagaatctgaaggaaagttacattgaggagaagttataa
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