Papaver somniferum (opium poppy): 113298696
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Entry
113298696 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113298696 isoform X1
KO
K18734
protein SMG8
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113298696
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113298696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
113298696
NCBI-ProteinID:
XP_026403291
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All DBs
Position
7:complement(147983199..147988602)
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AA seq
1205 aa
AA seq
DB search
MDTSNNSSSLRVLIRPSPSTNTTIATNSTISSDIPTSFTSSPLPLPTNSSSTDGVVVVGF
IGKKEEDLSQLINRIVDYNVFGSGNLGLKFPIHNREEEEKVKNWFHSRSISYYYDEERGI
VFLRFVSNICPEDEFPESSMGLDSGFEQHQYEDLQGMLLMFSVCHVIIYLQEGSRFHTQT
LKTLRLLQAAKHAPVPFMKSQFKPTLSSRVSSSSSTSHTTMFSPNPRNDSSHGRMSLMSG
LGSYSSFFPGQCTPVVLFVFLDDFPEGPNNTGYIVEDSAEASMSNPSLNLGGLPRPNLPV
KSSTSVVMLSRPMSKPEGTFRKKLQSSLEAQIRFLIKKCRILSGSEGNHAGSRGGGNPSS
TPLFSLEASRAVALLDRFTNQRGESLNFATALVEEVLNVKLASDSLLLESHYQATVKEDI
QCIKEFIYKQSDTLRGRGGLVSNSSSGSASGAGMVAVAAAAAAASAASGKPATTPVLPSL
ENWLSSSQLILEALISVRCGIPDESESIQIIKSKPVLRNGGSTQVERIPPARTGIDPVQS
AISLLESGKGLNIKFSTSWCQRALPAAKELYLKDLPACYPTSVHEVHLNKALHAFHSKVM
GPAVHIYAKKLRDECMTIWSSGRQLCDAISLTGRPCMHQRHNIETDGKLAETSVKPHSSG
FVFLHACACGRSRRPRDDPFDFETANVTFNSFPNCHNLLPALQLPQLSDTGPIKPSSWSL
IRVGGSRYYEPSKGLIQSGFCSTEKFLLKWTIMLEKPLKASNSAEEAVRGGPIEDPKLKS
VVDEGTKQVGDVENQRSEKISSLDKKIGSDRGIPRFNMRRPFSEVVAGSVATDAAFPPLQ
QRKQPTTSSEKSVKQRVPRNRGEENAQVTGEHQGSQVSEGLPSFSDISGRVGASGYPDGE
PSLQIGSNVVPISMVGGGMIKPSTTSKHANVYFGFEHECPQGHRFLLTSKHLNELGSFYS
LAEESRTQSVDGSERKSESSNSKKFAHDKAHSHASASMHKVRTSSRSNQRAANGSQHLDR
VVLFSEPGKEHSKFSVGKTHSESVEDLEERPEFSTIDDGVQPFSLLNRNIPIYMNCPHCR
TSKSKKGHHINFESTVSQLQRIFLVTPPFPVVLATCPSVQFEASCLAATVPDSERQLQFS
IGCRIILPPESFLTLRLPFVYGVQLENGRLHPFHHLENQPELTAWISGSTILQIMSKGSS
TDEEV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtctaataattcctcgtctcttcgagttctaattcgtccttcaccttcaact
aataccaccattgctactaattcaacaatctcatcagacatacccacttcctttacttca
tctccacttcctcttcctacaaactcttcttctacagatggtgttgttgttgtagggttt
attggaaagaaagaagaagacttatctcaattaattaatcgtattgttgattataacgta
tttggatcaggtaatttaggtcttaaattcccaattcataatcgagaagaagaagagaaa
gttaagaattggtttcactctcgaagtattagttattactatgatgaagagaggggcatt
gtatttttacgatttgtttccaatatttgtccggaagatgaatttccagagtcttcaatg
ggcttggattcgggttttgaacaacatcaatatgaggatcttcaaggaatgcttcttatg
ttctctgtatgtcatgtaatcatatatcttcaagagggttcacgtttccatacacaaaca
ctgaaaacattacgattactacaagctgcaaaacatgctccagttccatttatgaaatca
caatttaaacctaccttgagttctagagtttctagctcatcatctacgtcacacacaaca
atgttttcaccaaacccacggaatgattcttctcatggtcgtatgtcgctcatgtcgggt
ttgggatcgtattcgtcattttttccagggcaatgcacacctgtagtcttgtttgtattt
ctcgatgattttcctgagggtcctaacaacactgggtatattgtagaagattctgctgag
gcctcaatgtcgaatccgtctcttaatttaggtgggttacctagaccaaacttgcctgtg
aaaagttctacctcagttgttatgttatcgcgtccgatgagtaaacctgaaggtactttc
aggaagaaattacaatcatctcttgaagcacaaatacgatttttgattaagaaatgccgc
atcctgtcaggttctgaggggaaccatgctgggtcaagaggtgggggtaaccccagttca
acgcctttgttttccttggaggcttctagagcagttgctcttttagatagatttaccaat
caaagaggtgaatcattgaattttgcaactgctcttgtggaagaagttttgaatgtcaag
ctagcctcagatagtcttttgcttgaaagtcattaccaagctacagttaaagaagatatt
cagtgcataaaagagtttatttataagcagtctgataccctaagaggaagaggtgggttg
gtgagtaactccagtagtggctcagcttccggggctggtatggttgctgttgccgcagca
gctgctgccgcttctgctgcatctggtaaaccagccacaactcctgtgcttccgagtttg
gaaaactggctatcttccagtcaacttattttggaggcattgatctcagtgagatgtggg
attccagatgaaagcgaaagtatccaaatcattaaaagcaaacctgtgctcagaaatggc
ggttcaactcaggttgaaagaattcctcctgcgagaacagggatagaccctgtacagagt
gctatatcgttgttggaaagtggtaaaggcctgaacatcaaattctcaacttcatggtgt
cagagagcccttcctgctgctaaggagctttacctcaaagacttacctgcctgttatcca
acttcagttcacgaggtacatttaaacaaggctttgcatgcttttcactcaaaggtgatg
gggcctgctgtgcatatttacgcaaagaaattgcgagatgaatgcatgaccatttggagt
tctggaaggcaactatgtgatgctataagtttgactggaagaccatgtatgcaccaaaga
cacaatatcgagactgatggaaaacttgcagaaacttcggtcaagccacattctagtgga
tttgtattcctccatgcatgtgcttgtggccgttcaaggcggcctcgagatgatccattt
gatttcgaaactgcaaatgttactttcaatagttttccaaactgtcataatcttcttcca
gcactccaactacctcagctaagtgatacgggtccaataaagcctagctcatggagtctt
attcgagttggaggatcaaggtattatgaaccttccaaggggttgattcagagcgggttc
tgctctactgagaaatttcttttgaagtggacgattatgcttgagaaaccactaaaagca
agtaattcagcagaggaagcagtccgaggaggacctattgaggatcctaagcttaagtca
gtcgtagatgaaggaacaaagcaggtaggagacgttgaaaatcaaaggtctgagaaaatt
tcttctcttgataaaaagataggttctgatagaggcatcccacgttttaacatgagaaga
cctttttctgaggttgttgctggatcagttgctacagatgcggcatttcctcctcttcag
cagagaaaacagccgacaactagttcagaaaagagtgttaaacaaagggttccgagaaat
agaggcgaggaaaatgctcaagtaactggggagcaccaaggatctcaagtatctgaaggt
ttgccttcttttagtgacatctcaggtagggttggggctagtgggtatccagatggtgaa
ccttcgttacagataggaagcaatgtagttccaattagcatggttggtggtggaatgatc
aaaccaagcactacttcaaagcatgcaaatgtgtattttggatttgagcatgagtgtccc
caaggccatcgtttcttattgacatcaaagcatcttaacgagcttggttccttctattca
ttggctgaagaatctcgcacccaatctgttgacggctcggagcgaaaatcagaatcatca
aactctaagaaatttgcacatgacaaagctcattcacacgcatccgcttctatgcacaag
gtgaggacttcaagtaggtctaaccagagagcggctaacggtagccaacatttggataga
gtagtactgttctccgaaccaggaaaagaacatagtaagttctctgtcggaaagacacac
tccgagtctgttgaagatcttgaagagaggcccgagttttccactatcgatgatggtgtt
cagcccttttcccttctgaataggaatatacctatatatatgaactgcccacattgcagg
acctctaaaagtaagaaaggccaccacatcaacttcgaaagcacagtatcacagcttcaa
aggatttttctggtaacacctccatttccagtcgttttagcaacatgcccaagtgtacaa
tttgaggcttcatgcttggctgcaactgttcctgactctgagcgacaattacagttcagc
attgggtgtcgaattatcttaccgccagagagtttcctcacactgcgactcccatttgtc
tatggtgtgcaactagaaaatggaaggttgcatccttttcaccaccttgaaaatcaacca
gaactaactgcatggatatctggaagcacaattttacagattatgtccaaaggaagcagc
acagatgaggaagtttag
DBGET
integrated database retrieval system
