Papaver somniferum (opium poppy): 113355567
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Entry
113355567 CDS
T05758
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113355567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113355567
Spliceosome [BR:
psom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113355567
Complex C
U4/U6.U5 tri-SnRNP related factors
113355567
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
113355567
NCBI-ProteinID:
XP_026454243
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All DBs
Position
3:23289255..23294261
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AA seq
440 aa
AA seq
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MEIQTSGKPIDSLLEKVLCMNILSSDYFKELFRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHQDSPYIRAVGFLYLRYAADPKTLWGWFEPYVT
DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRTPVPIMRQIVSNLERMKLPTKHAG
VTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPQDRDEARKS
PSNYRSRSHDSDRGRSDKGSDRDRSDRDRDRSDRDRDRDRSDRDRGRDRDHSERGRSRDR
DRYDRDRERDRDVDRDRRYDYERRGSQSRREDDNRSSRYAERESSSRHRRSDSHGSRSRS
RSRSRSRSRSLQVPPNNRHSESSLKVEENKEKNSVSSNLAKLRDLYGDTSAQRGSESGTE
RRAKDSSNEEVFKLGGSTWR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagatacaaacatcaggaaaaccgatcgattcattgttggagaaggttctttgtatg
aacatcctttcttcagattattttaaagagctttttagattgaagacttaccatgaagtt
atcgatgagatatataatcaagttgatcatgtagagccatggatgactgggaattgtagg
ggaccatcaacagcattttgccttctgtacaagttcttcacaatgaagcttactgttaaa
caaatgcacggtctcttgaaacaccaagattcgccttatattagagctgttggatttctg
tacttgcgatatgctgctgatccaaaaactttatggggctggtttgagccatatgtcaca
gatgatgaggaattttctcctggatcgaacggccgaatgacaactatgggtgtctatgta
cgtgatctacttcttggccagtactacttcgataccctgttcccgcggactcctgtgcca
ataatgaggcagattgtttctaaccttgagcgaatgaaactccccacgaaacacgctggt
gttactggggaaaccacccgtcatggatcggatgacactgcacgtcgaccaccttctgtg
aaagctgccctttcagtctctttcggccaacgtgctcctcaccgagcttcaacgagagat
tcgtcaccagttcgccgtacattgccaccacctcaagatagagacgaggcacgaaaatct
cccagcaattatagaagccggagccatgactctgatcggggtcgttctgacaaaggcagt
gaccgagatcgttccgacagagacagagatcgttctgacagagatagagacagagatcgt
tctgatagagatagaggtcgagatcgagaccattcagaaagagggagatcccgagatcgt
gaccgttatgacagagatagggagcgagaccgggatgttgacagagacaggagatacgac
tatgagcgacgtgggagtcagagccgtagagaagacgataacaggtcttctaggtatgca
gaaagagaaagtagcagcaggcatcggagatccgactcacatggcagtagaagcagaagt
agaagcagaagtagaagcagaagtcggagtttgcaggttccacctaacaatcgccattca
gaatcttctctaaaagtagaagaaaataaggaaaaaaattcagtttcgagcaatctagcc
aagttgagggatttatatggagatacaagtgctcagagaggaagtgaaagtggaacagaa
cggcgtgcaaaagatagcagtaacgaagaggttttcaagcttggtggttctacttggagg
tga
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