Papaver somniferum (opium poppy): 113356731
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Entry
113356731 CDS
T05758
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
psom03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113356731
03083 Polycomb repressive complex
113356731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113356731
Enzymes [BR:
psom01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113356731
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
113356731
HDAC complexes
Sin3A-HDAC complex
113356731
BRAF-HDAC complex
113356731
REST complex
113356731
SHIP complex
113356731
MiDAC complex
113356731
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
113356731
Heterochromatin formation proteins
Other heterochromatin formation proteins
113356731
Chromatin remodeling factors
NuRD complex
113356731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
113356731
NCBI-ProteinID:
XP_026455725
LinkDB
All DBs
Position
3:complement(86711262..86716061)
Genome browser
AA seq
508 aa
AA seq
DB search
METGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPFPARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLSILELLKTHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHGKGKYYSLNVPLDDGI
DDESYQNLFKPLMEKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEIEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRLILEEIRGKLLENLSKLRHAPSIQFQERPPDTELPEGDEDQEDADERWGPDSDMEV
DDERKPLANNSQPARVKREVDEPEVKEMEDQKVAVEQVKGVETKAEENSGSKAPDAVPMS
IDEPTPVKVEQENMTKPSDQSAQMYPKP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgggggtaattcccttccatcaggccctgatggggtgaagaggaaagtatca
tatttttatgatccagaagttggaaattactattatggacaaggtcacccgatgaagcct
catcgcattagaatgacccatgcactcttggctcattatggcttgcttcagaatatgcaa
gtcttaaagccttttcctgctcgagatagggatctttgtcggtttcatgcggatgattat
gttgcttttttaagaagtatcactccagaaacccagcaggaccaacttaggcagctaaag
aggttcaatgttggtgaagattgccctgttttcgatggtctttattctttctgtcagacg
tatgctggtgggtcagttggtggtgctgtgaagttaaaccatggactttgtgatattgcg
ataaattgggcaggtgggcttcatcatgctaaaaagtgtgaggcttctggattctgttat
gtgaacgatatcgtcttgtcaattttggaacttctcaaaacacacgagcgggtcctgtat
gtggacattgatatccaccacggagatggagtagaggaggctttctacacaactgataga
gtcatgactgtttcattccacaaatttggcgattattttccaggcacaggagacatacga
gacattggacatgggaaggggaaatactactccctgaatgtaccccttgatgacgggatt
gatgatgagagctaccagaacttattcaaaccactgatggagaaagtgatggaaattttc
agacctggagccgtggttcttcaatgtggcgctgactccttatctggtgacaggttaggc
tgcttcaatctttccatcaaaggtcatgctgagtgtgtgaaatacatgagatcctttaat
gtgccattgctgctgctgggtggtggaggatatacgatacgtaatgttgctcgttgttgg
tgttacgagacaggagtcgcacttggtgtagaaattgaagacaagatgccacagcatgaa
tactatgagtattttggtcctgattatactctccatgttgctcccagtaatatggagaac
aagaactcacgtctgatattggaagagataagagggaagcttcttgagaatctctcgaag
cttcggcatgcacctagcatccaatttcaggaacgaccacccgacacggagcttccagag
ggagatgaagatcaagaggatgcagatgagagatggggtcctgattctgacatggaagtt
gatgacgagcgtaagcctctggcaaacaactcacaacctgcaagagtgaagagagaagtc
gacgaacctgaagttaaagagatggaggatcagaaagttgcagttgagcaagtcaaaggc
gtggaaacaaaagctgaagaaaactcaggctctaaggctccagatgcagttcctatgtca
atagatgaaccaacacctgtgaaagtcgaacaagaaaacatgaccaagccatctgaccag
tctgctcagatgtaccccaaaccataa
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integrated database retrieval system