Paraclostridium sordellii: RSJ16_04220
Help
Entry
RSJ16_04220 CDS
T05252
Name
(GenBank) thiamine ABC transporter permease
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psor02000
]
RSJ16_04220
Transporters [BR:
psor02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RSJ16_04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_24
RsgA_GTPase
DEAD
AAA
AAA_22
AAA_18
AAA_30
AAA_29
TsaE
NB-ARC
AAA_25
IstB_IS21
MerT
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AUN13469
LinkDB
All DBs
Position
803382..805082
Genome browser
AA seq
566 aa
AA seq
DB search
MLKEFIKYYKPYKKLFILDLLAAFTVALCDLVYPMITRNIMNDVVPNKDLRMLIVFAITL
LVIFIIKAGLNYFMQYWGHVVGVRMQADMRNYVFTHLQKLPNSYFNNNKSGVIMSRIIND
LMEVSELAHHGPEDLFVSLVMLIGSFLILLGINVPLTLIVFAILPFIILFAITQRKKMGR
AFMETRVKTGDVNAILENSIAGMRVTKSFCTEKEELDKFNESNNIFKHAREGAYKVMAEY
FSGMFLFIDLLNLVVLIVAGYFAYMNYINLGDFTAYLLYVNMFIQPIRKLINFTEQYQNG
MTGFERFREIINEETEKEAKDPIQLRNVKGNIDIENVSFTYEDDNEVFKNLSLSIEAGKT
VALVGPSGGGKTTLCNLIPRFFDFEEGDIKIDGISVKDVSLTSLRKNIGVVAQDVFLFTG
TIKDNIIIGKSDATGEEIIQACKKARIHDFIMTLPEGYETYVGERGVKLSGGQKQRISIA
RIFLKNPPIMILDEATSALDNVTEHEIQKSLEELGKNRTNLVVAHRLSTIQNADEIIVLT
PNGIEERGTHKELIEKDGVYSKLHRK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagaatttattaaatattataaaccatataaaaagttgtttatactcgattta
ttagctgcttttactgtagctttatgtgatttagtttatcctatgataactagaaatata
atgaatgatgtagttccaaataaagatttgagaatgcttatagtatttgctattacttta
ctagttatatttataattaaagcagggttaaactactttatgcaatactggggtcatgtt
gtaggagttagaatgcaagcagatatgagaaattatgtttttactcatctacaaaaactg
cctaattcatattttaataacaataaatctggagttataatgtctagaattataaacgat
cttatggaagtttcagaacttgcacatcatggaccagaagatttatttgtatcattggta
atgctaattgggtcatttctaatattacttggaattaatgtgccattaactttaatagtg
tttgctattttaccatttataattttatttgctataactcaaagaaagaaaatgggaaga
gctttcatggaaactagagttaagaccggtgatgtaaatgccatattagaaaatagcata
gctggaatgcgagttactaagtcattttgtactgaaaaagaagaactagataagtttaat
gaatctaataatatatttaaacatgctagagaaggtgcatataaagttatggccgaatat
ttctcaggaatgtttttattcattgacttattaaatttagtagttttaattgttgcagga
tattttgcttatatgaactatataaacttaggagactttactgcatatcttttatatgta
aacatgtttattcaaccaattagaaaattgataaactttacagaacagtaccaaaatggt
atgactggatttgaaagatttagagaaataataaatgaagaaactgagaaagaagctaaa
gatcctattcagctaagaaacgtaaaaggaaatatagatattgagaatgtatcatttaca
tatgaagatgacaatgaagttttcaaaaacttgagcctgtctattgaagctggaaagact
gtagcattagtaggtccatctggaggggggaaaactactttatgtaatcttatacctaga
ttctttgattttgaagagggagatattaaaattgatggaataagtgtaaaagatgtaagc
ttaacttctcttagaaaaaatataggggtagtagctcaggatgtatttttatttacaggt
acaataaaagataacataataataggtaaatctgatgcaacaggtgaggaaatcatacaa
gcttgtaagaaggctagaattcatgattttataatgacattgcctgaaggttatgaaact
tatgtaggagaaagaggcgtaaagttatctggtggtcaaaagcaaagaatatctattgct
agaatcttcctaaagaatcctccaatcatgattttagatgaagctacatcagcacttgat
aatgtaactgaacatgaaatacaaaaatccttagaagagttaggaaaaaatagaacaaat
ttagttgtagcacataggctatcaacaatccaaaatgcggatgaaataattgttttaact
ccaaatggtattgaagaaagaggaactcataaggaacttatagaaaaagatggagtatac
tcaaaacttcatagaaaataa
DBGET
integrated database retrieval system
