Paraclostridium sordellii: RSJ16_15030
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Entry
RSJ16_15030 CDS
T05252
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
psor
Paraclostridium sordellii
Pathway
psor00550
Peptidoglycan biosynthesis
psor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSJ16_15030
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psor01011
]
RSJ16_15030
Peptidoglycan biosynthesis and degradation proteins [BR:
psor01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSJ16_15030
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
IF2_N
PABP
Motif
Other DBs
NCBI-ProteinID:
AUN15470
LinkDB
All DBs
Position
complement(3026494..3028473)
Genome browser
AA seq
659 aa
AA seq
DB search
MSKIKRISKKRLVAVLIMACCVFFMLIFRTGYLQIVKGDWLTAKALDQQTRDIPIEPKRG
TIYDKNMKELAVSVTKYTIWAKPVEVKDKEKAAKVISNLIDEEHEEVLKLLKKKNMALVK
VKRWIDDETAEKIREAKLPGIWVAEDNQRYYPYGNFASYVLGHTSDDATGIAGVEMQYDK
HLKGKSGRLIVSTDASGREIPHGMEKYYEPVQGNGLVLTIDEVIQHYTEKAVQKAYELNN
AKRVTAIAIDPKTGDVLSMASKPDYDPNNSRTPIYPYYEEELEGYGDKDKIKGYFSMWRN
PAVSDTYEPGSTFKLITSSAALEEGVIKEGEKFNCTGSVMVGGRKIKCWRHYKPHGAQEF
KQGVQNSCNPVFVELGSRLGVSKMYDYIEGFGFMDTTKLDLPGEAKGILYNEKNVGPVEL
ATISFGQSISVTPMQLISAIGAIANDGKLMQPRVVKELVDNQGNVTESIKPKVVRQVISE
DTSNKMMEIAESVVSEGSGKAAYIPGYRIGGKTGTAQKVIDGKYAQGKYICSFVGIAPCD
DPQIVVLAIVDEPTGVSAFGSTTAGPIVKEIMNDSLKYLGVEPKYSEEEKQEYEKEKVKV
PNIIDLSVEDAIKVLEENKLKPIQDVDTEIKGTAKVVDIFPKPGAEVSVDSGIVIYTEN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaattaagaggataagtaaaaaacgattagtagcagttttaataatggcatgt
tgtgtattttttatgcttatatttaggactggatatttacaaatcgtaaagggagattgg
ttaacagctaaagctctagaccaacaaactagggatatacctatagaacctaaaagggga
actatatatgataaaaatatgaaagaattagcagtaagtgtaacaaagtatactatatgg
gcaaaacctgtggaagtaaaagataaagaaaaagctgctaaagtaatatctaatctaata
gacgaagaacatgaagaggttttaaagttattaaaaaagaaaaatatggcgctagtgaaa
gttaaaagatggatagatgatgaaactgctgaaaaaataagagaggctaaattaccagga
atatgggtagctgaagataatcaaagatattatccatatggaaattttgcatcttatgta
ctaggacatacttcagatgatgctacaggaatagcaggagttgaaatgcaatatgataaa
cacttaaagggaaaatcaggaaggcttattgttagtaccgatgcatcaggaagagaaata
cctcatggaatggaaaaatattatgagccagttcaaggaaacggtttggttttaactata
gatgaagttatacaacactatacagaaaaagcagttcaaaaagcttatgaattaaataat
gcaaaaagagtaactgcaatagctatagatcctaagactggagatgtattatctatggca
tctaaacctgactatgatcctaacaattcaagaactcctatatatccatactatgaagaa
gagttagagggttatggagacaaagataaaataaaaggatatttttctatgtggagaaat
cctgcagttagtgatacatatgaacctggatcaacatttaaattaataacatcttcagcg
gcactagaagaaggtgttattaaggaaggtgagaagtttaactgtacaggaagtgtaatg
gttggaggaagaaaaattaaatgttggagacactataaacctcatggagcacaagaattt
aaacaaggggttcaaaattcttgtaaccctgtatttgtggagctaggaagtagacttgga
gtatctaagatgtatgactatattgaaggatttggatttatggatactacaaagttagat
ttacctggagaagctaaaggaattttatacaatgaaaaaaatgttgggcctgtggaattg
gctactatatcttttggtcaatcaatatctgttactccaatgcaattaataagtgccata
ggtgctatagcaaatgatggaaaacttatgcaacctagagttgtaaaagagttagtagat
aatcaaggaaatgtaacagaaagtataaaaccaaaagtagttagacaggttatatcagaa
gatacttcaaataaaatgatggaaatagctgagtcagttgttagtgaaggttcaggtaaa
gcagcttacataccaggttatagaataggaggtaagacaggaactgctcaaaaagttatc
gatggtaaatatgcacaaggtaaatatatatgttcatttgtgggtattgctccatgtgat
gatccgcaaattgtagttttggctatagttgatgaacctacaggagttagtgcatttggt
agtacaacagcaggacctatagtaaaagaaataatgaatgattctttaaaatatttagga
gttgaaccaaaatatagcgaagaggaaaaacaggagtatgaaaaagaaaaagttaaagtt
cctaatattatagatcttagtgttgaagatgcgattaaagttttagaagaaaataaacta
aagccaattcaagatgtagatacagaaattaaaggaacagctaaagtggtagatatattc
ccaaaacctggagcagaagtttcagtagattcaggaatagttatatatacagaaaactaa
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