Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3002
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Entry
PSPPH_3002 CDS
T00266
Name
(GenBank) dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPPH_3002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psp02000
]
PSPPH_3002
Transporters [BR:
psp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSPPH_3002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_16
TniB
AAA_29
AAA_33
ABC_ATPase
AAA_23
nSTAND3
RsgA_GTPase
MMR_HSR1
nSTAND1
DUF87
AAA
AAA_30
FtsK_SpoIIIE
TsaE
ATP-synt_ab
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AAZ37443
UniProt:
Q48HF1
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Position
3485101..3486720
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AA seq
539 aa
AA seq
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MSHTAMPQIKLAVEDLRVEFSHAGKVTAAVRDVSFSLGREKLAIVGESGSGKSTVGRSLL
RLHPATARVTAKTLRFGDIDLLECNEKQMQSIRGRRMSMIMQDPKYSLNPVIKVGEQIAE
AYLAHHRVSKKEARERTLDMLAKVHIREPARVYELYPHEVSGGMGQRIMIAMMVITDPQV
IIADEPTSALDVSVRRQVLNVLEELVSERDLGLIFISHDLNMVRHFCDRVLVMYAGRVVE
SLNASELDQARHPYTKPPCPAWTTRVPACRFCNAIPFGSLTENAPMAMITVDSLNLSFGT
GPALNQVLRDVNLQVEQGQSFGLVGESGSGKTTVLRCLAGQYHHWSGALSVASQTVQRKL
DASHYRTVQMVFQDPYASLHPRHTIDAALKEPLSIHRIGDRDRRVCEVLNKVGLNESFRF
RYPHQLSGGQRQRVAIARALILEPRVLLLDEPTSALDVSVQAEILNLLADLRRQQGLTYL
MVTHDLGVVAHLCDRVAVMQQGQVVETLDSSQLINNQARHEYSRLLIQASRDMDLRPTG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacacagccatgccacagataaagcttgcagtagaagatttacgcgtcgagttc
agtcatgcgggcaaggtcacggcagccgttcgcgacgtgtcattcagccttggccgggaa
aagctggcgattgttggcgaatcgggatcgggcaagtccacggtcggtcgcagcctgctg
cgcctgcatccggcaacggccagggtcacggcgaaaaccctgcgtttcggcgatatcgac
ttgcttgaatgcaacgaaaaacagatgcagagcattcgcgggcggcgcatgtcgatgatc
atgcaggacccgaaatactcgctgaacccggtgatcaaggtaggcgaacagatcgccgag
gcctatctggcgcatcacagggtttcgaaaaaggaagcccgcgaacgcacgctggacatg
ctcgccaaggtgcacatccgcgaaccggcgcgggtctacgaactgtatccccatgaagtt
tcgggcggtatgggccagcggatcatgatcgcgatgatggtgatcaccgacccgcaggtg
atcattgccgacgagccgacttccgcactggatgtatcagtgcgtcgtcaggtgctcaat
gtgctggaagagctggtcagcgagcgcgatctgggcctgatcttcatcagccacgacctg
aatatggtccgtcacttctgcgaccgggtgctggtgatgtacgccggacgggtcgtggag
tcgctgaacgccagcgagctggatcaggcgcgtcatccctacactaagccgccctgccca
gcctggaccacccgcgtgccagcctgccggttctgcaacgcgatcccctttggctcactc
actgagaatgctcccatggcaatgatcacagtcgattcactgaacctgagcttcggcact
ggcccagcgctgaatcaggtgctgcgtgacgtcaacctgcaggtcgagcaaggccagtcg
ttcggcctggtcggcgaatccggctcgggcaagaccaccgtgctgcgctgcctggcagga
caatatcatcactggagcggcgcactgagcgtggccagccagaccgtgcagcgcaagctc
gatgccagtcactaccgcaccgtgcagatggtctttcaggacccctatgcctcgctgcat
ccgcgccataccatcgacgcagcgctcaaggagcccttgagcatccaccggatcggtgac
cgtgaccgtcgcgtctgtgaagtgctgaacaaggtcggtctcaacgagagctttcgcttc
cgttacccgcatcagctgtccggcggccagcgccagcgcgtcgctattgcaagggcgctg
atcctcgaaccgcgcgtactactgctcgacgaacccacctcggcactggacgtttcggtg
caggccgaaattctcaacctgctggccgacttgcgtcgtcagcaaggcctgacctacctc
atggtgacccacgatctcggcgtagtggcgcacttgtgtgaccgggttgcggtcatgcag
caaggccaggtggtggaaaccctcgatagcagccagttgatcaacaaccaggctcggcac
gagtattcgcgactgctgattcaggccagccgcgacatggacctgcgcccgacgggatga
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