Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3967
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Entry
PSPPH_3967 CDS
T00266
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSPPH_3967 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_3967 (ung)
Enzymes [BR:
psp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSPPH_3967 (ung)
DNA repair and recombination proteins [BR:
psp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSPPH_3967 (ung)
Prokaryotic type
PSPPH_3967 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAZ35800
UniProt:
Q48ET5
LinkDB
All DBs
Position
complement(4529825..4530517)
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPIWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLN
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGIEPIDWRLPVL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacgaccgcatcaagcttgagcccatctggaaggaagcgctgcgcgatgaa
ttcgagcagccctatatggcgcagttgcgcgagtttctgcgccaggagcatgccgcgggt
aaagagatctatccgcctgggccgctgattttcaatgcgctgaattcgacgccgctcaac
aatgtgaaagtggtgatcctcggtcaggacccgtatcacggtccgaatcaggctcacggc
ctgtgtttctcggtgcagccaggcgtgccgacaccgccgtcactggtcaatatctataaa
gaactcaaacgcgacctgaatatcgacattcccaatcacggctgcctgcaatcatgggct
gatcagggcgtgctgttgcttaacacgactcttaccgtcgagcgcgccaacgcagcttcg
catgcgggaaaaggctggcagcacttcacggaccggatcattcaagtggtcagcgagcat
cagccgcatctggtgttcctgctgtggggcgctcatgcgcagagcaagcagaaactggtc
gatgcgaccaagcacctggtgctgacctctgtccatccttcgccgttgtcagcctacaaa
ggcttcctgggtaacgggcatttcgggcgtgccaacaagtaccttgagcaaaacggcatc
gagccaatcgactggcgcttgcccgttctctga
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