Polyodon spathula (Mississippi paddlefish): 121297572
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Entry
121297572 CDS
T07273
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121297572 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297572 (sec24a)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121297572 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
121297572
NCBI-ProteinID:
XP_041079879
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Position
22:complement(76935..93299)
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AA seq
1198 aa
AA seq
DB search
MSSPAAGLSSQNGAGRQACSNGPIQNLIMMQAPGRGYNTAAQTMHPQHMPAKAPLEQPAG
QYHYGCYQSSPPVSVYQGPGQSAPPVSVYQGPGQSAPPVSMYQGPGHSAPPVSMYQGPRQ
TNMTRPPMRPLQPHQAGSARIAAPAPSSTPPPVCSNSFYPGSQIPPHSQWAYGTPPPMSQ
PSVATNHVTSAPSQLSAARYGIQNSPPQGPPAPLNTSVQPGQPSGYGMQNSPPQRPPASL
NSSVQPGQPSGYGIQNSPLQGPSAPLNSSVQPGQPSGYGIQNSPPQRPPAPLNISVQPGP
APPPVSPLSSQSYQSGRQPFGPPPPVRPEAPPTGQLNNAATPPPPAAAAKQEVPVPGAER
TQIHNSFDALESGGRNAAQHHPQMGRAVGLSYPSLPLGYQNMAVSPCAPGMQPLSQRYPA
GAQSFQQAALGPAQLGSALGGMNLQQSQPEALRAINLLQERNLLPRGPVTPPVPCLPQDL
QRLNCSPEVFRCTLTNIPQTQSLLNKAKLPLGLLLHPFKDMSQLPVVTSSTIVRCRSCRT
YINPFVTFLDQRRWKCNLCYRVNEVPEEFMYNPVSRSYGEPHKRPEVQNPTIEFIAPSEY
MLRPPQPAVYLFVLDVSHNAVETGYLDTVCRSLLDSLSLLPGDTRTKIGFITFDSTVHFY
NLQEGLSQPQMLVVSDIEDIFIPTPDSLLVNLNECKELVQDLLKGLPQMFTRTLETQCAL
GPALQAAFRLLSPTGGRVSVFQTQLPSVGVGALKSREDPNQRASAKDIPHLTPATDFYKK
LALDCSGQQIAVDLFLLSGQYCDLASLACISKYSAGGVHYYPSYHHLHNPAQVEQLQRDL
KRYFSRKIGFESVMRVRCTKGLSIHTFHGNFFVRSTDLLSLPNINPDSGFAVQMSIEENL
VDMQVVSFQAALLYTSSKGERRIRVHTLCLPVVNSMADIFAGADVQAITGLLASMAVDRS
VTASLSDARDALVNAAIDSLRAYRSGGLSVQQPGLVTPACLRLLPLYVVALLKQKAFRTG
TSTRLDERVFAMCQLKYQPLAYLMLMIHPALYRVDNLTDEGAISIADRTVPQPATLQLSV
EKLSRDGSFLMDSGSVLYLWVGRNCAPNFITQVLGVPSYTAIPQTMTQLPELDTAESTRT
RAFISWLREQRPFYPILHVIREESPLKASFMQHMVEDRTESALSYYEFLLHLQQQVNK
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcctgctgctggactcagctctcagaacggggcagggaggcaggcgtgtagc
aacggccctatacaaaatctgataatgatgcaggccccagggcggggttacaatacagca
gcccagacgatgcatccacaacacatgccagccaaagctcctttagagcaacctgccgga
cagtatcactatggctgttatcagagctctcctcctgtgagcgtgtatcagggacctggt
cagagcgctcctcctgtgagcgtgtatcagggacctggtcagagcgctcctcctgtgagc
atgtatcagggacctggtcatagcgctcctcctgtgagcatgtatcagggacctcgtcaa
accaacatgaccaggcctcccatgagaccccttcagccacatcaagcaggatctgccagg
atagcagccccagctccaagctccacacctccacctgtgtgttctaatagtttttatcca
ggctcccagatcccccctcattcacaatgggcgtatggcacgccccctcccatgagccag
ccttcagtggccacaaaccatgtgacgtcagcaccaagccagctctctgcagcacgttat
gggattcaaaacagccccccgcaagggccccctgctcctctgaacacctccgtgcagcca
ggccagccctctgggtatgggatgcagaacagccccccgcagcgaccccctgcttctctg
aacagctccgttcagccaggccagccctctgggtatgggatccagaacagcccccttcag
gggccctctgctcctctgaacagctctgtgcagccaggccagccctctgggtatgggatc
cagaacagccccccgcagcgaccccctgctcctctgaacatctctgtgcagccagggccg
gccccccctcctgtcagtccactttcatcacaatcataccagtctggcaggcagccattc
gggcctccccctcctgtgagaccagaagcgccccctactggacagttaaacaatgcagcc
actcccccgcctcctgctgctgctgctaaacaagaagtaccagtaccaggagcagaaaga
acgcagatccacaacagctttgatgctttggaaagtggaggcagaaatgctgcacagcat
catccacagatgggcagggcagttggcctgtcttatccctcattacctcttggctaccag
aacatggctgtctccccctgtgcaccgggaatgcagcctctgagccagcgttaccctgca
ggagcccagtcctttcagcaggctgcgctgggtccagctcagcttggctctgctctggga
ggaatgaatctgcagcagagccagcctgaagcactgagagccatcaacctgctccaggag
aggaacctcctaccccgtggtcccgtcaccccccctgtgccctgcctgccccaggacctg
cagcgtctcaactgcagtcccgaggtctttcggtgcactctgaccaacatccctcaaact
cagtctttgctaaacaaagctaagcttcccttggggttactcctccacccattcaaagac
atgtcgcagctgccggtggtcacctccagcaccatcgtgaggtgtcgatcctgcagaacc
tacatcaaccccttcgtcacattcctcgaccagaggagatggaagtgcaacctgtgctac
agagtcaatgaggttccagaagaatttatgtataaccctgtaagcagatcgtatggagaa
ccacataaaaggccagaagttcaaaatcccacaattgagtttattgcaccttcagaatat
atgctgcggcccccccagcctgcagtatacctcttcgtactcgatgtatcccacaatgca
gtagagactggatacttggacacggtgtgccggtcactcctggacagtctcagcttactg
ccaggagacaccaggacaaagataggcttcattacatttgacagcacagtccatttctat
aacctccaggagggcctgtcccagcctcagatgctggttgtctcagacattgaagatatc
ttcataccaacaccagacagcctgttggtaaacctcaacgaatgcaaggagctggtccag
gacttgttgaaaggcttgccccagatgtttaccaggaccctggagacacagtgtgcgctg
gggccagctctacaagctgccttcaggctgctgtcccccactggaggccgggtctctgtc
ttccagacacagctgccttctgtaggggtcggggcactgaagtccagagaagatcccaac
cagagggcttctgcaaaggatataccgcatctgactcctgccactgatttctacaaaaag
ctggccctggactgttctgggcagcagattgctgtggatcttttcctgcttagtggacaa
tactgtgatttagcttcattagcctgcatatccaagtattctgcaggcggagtccactac
tacccttcatatcaccacctgcacaaccctgcccaggtggagcagctccagagagacctg
aagcgctacttcagcagaaagattggcttcgagtcagtcatgagggtgcgctgtaccaaa
ggtctttctatacataccttccatggaaacttctttgtccgttcgacggatctgctgtcg
cttcccaacatcaacccagactcagggtttgctgttcagatgtcaattgaggagaatctc
gtagacatgcaggtggtttctttccaggctgctcttctctacacttccagcaaaggggag
cggcgcatacgagtccacactctttgtttaccagtcgtgaactccatggctgacatcttc
gctggagcggacgtgcaggccatcacaggactgctggccagcatggcggttgaccgctcg
gtcacagccagtttgagtgatgcccgcgatgctctggtgaatgctgcgattgactctctg
cgtgcttatcgctctggcgggcttagtgtgcagcagcctggccttgtcacccctgcctgc
ctgcgcctcctccctctctatgtggtggccctgctcaagcagaaagccttccgcactgga
acgagcaccaggctggatgagcgtgtttttgcgatgtgtcagctgaagtaccagcccctg
gcttacctgatgctcatgatccatcctgctctgtacagagttgacaatcttacagacgag
ggggctatcagcatcgctgacagaacagtccctcagcccgcgactctgcagctgtctgtg
gagaagttgagcagggatggatccttcctgatggactcgggctcggtactgtatctgtgg
gttggaagaaactgtgcacctaactttattacccaggtgctgggcgttcccagctataca
gcaatacctcagactatgactcaactcccagaattagacacggctgagtcgacaagaaca
agagccttcatttcttggttaagggaacaaagacctttttacccaatcttgcatgtaatc
agggaggaaagtcccctcaaggcaagctttatgcagcacatggtcgaggacaggacagaa
tctgctctgtcgtactacgagtttctgctccatttacagcagcaagttaacaaataa
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