Polyodon spathula (Mississippi paddlefish): 121312890
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Entry
121312890 CDS
T07273
Name
(RefSeq) septin-7-like isoform X1
KO
K16944
septin 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121312890
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121312890
04812 Cytoskeleton proteins [BR:
pspa04812
]
121312890
04147 Exosome [BR:
pspa04147
]
121312890
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
121312890
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Sperm associated proteins
121312890
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
121312890
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121312890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
FeoB_N
Ras
AAA_16
AAA_22
AAA_29
ABC_tran
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
121312890
NCBI-ProteinID:
XP_041100710
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All DBs
Position
3:24893518..24936660
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AA seq
461 aa
AA seq
DB search
MCVAESRGRRKSEKGRGISVNERLSAEAAGNVNIMVAQQKNLEGYVGFANLPNQVYRKSV
KRGFEFTLMVVGESGLGKSTLINSLFLTDLYSAEYPGPSHRIKKTVQVEQSKVLIKEGGV
QLLLTIVDTPGFGDAVDNSNCWQPVIDHIDSKFEDYLNAESRVNRRQMPDNRVHCCLYFI
APSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQENKIRIYEF
PEMDDEEENKLVKKITDRLPLAVVGSNTVIEVSGKRVRGRQYPWGVAEVENSEHCDFTIL
RNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVDNNRNKGQLTKYDTVEGISPLAQ
MEEERREHVTKMKKMEMEMEQVFDMKVKEKIQKLKDSEAELQRRNEQMKKNLEAQHKELE
EKRRQYEDEKMNWEAQQRILEQQKLDVSRTLEKNKKKGKIF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttgcagaatcgaggggccgacgtaaatccgagaagggaaggggaatatcggtc
aatgaaagattgtctgctgaggcggctgggaacgtcaacatcatggtagctcaacagaaa
aaccttgagggatatgtgggttttgcaaatctcccaaatcaagtatacagaaagtctgtg
aaaagggggtttgagttcacactgatggtagtaggtgaatctgggcttggaaagtcaaca
ttgatcaactccttgtttctgacagacttgtactcggcagagtatcctggtccctcacac
agaatcaaaaagactgtacaggtggaacagtccaaagttttaataaaagaaggcggggtc
cagttactacttacaatagtagatacacctggatttggagatgctgtggacaacagtaac
tgctggcagcctgtcatcgatcacattgatagtaagtttgaggattacctgaatgcagag
tctcgtgttaacagacgtcagatgccagataacagagtgcattgctgcttatacttcatt
gcaccttcaggtcatgggctaaaacccttggatattgagttcatgaaacgattacatgaa
aaagttaatattatcccactcattgccaaagctgatacactcacgccagaagagtgccaa
cagtttaagaagcagataatgaaagagatccaggaaaataaaatcagaatatatgagttt
ccagagatggatgatgaagaggaaaacaagttagttaaaaagatcacggatcgtttacca
ctggcagtagtgggtagcaatactgtcatagaagtcagtggcaaacgagtcagaggaagg
cagtacccctggggagttgcagaagttgaaaacagtgagcactgtgacttcacaattcta
cgaaacatgctgatcagaacccacatgcaggatctgaaagatgttaccaacaacgttcac
tatgagaactacaggagcagaaagctggcagctgtgacatacaatggtgtggataacaac
agaaacaaaggacagctcaccaaatatgacacagttgaaggcataagccctcttgcccag
atggaggaggagaggagagaacatgtgactaagatgaaaaagatggagatggaaatggag
caggtctttgatatgaaagtcaaggagaagattcagaaactgaaagactctgaggcagag
cttcagcgacgcaatgagcagatgaagaaaaacttggaagcccagcacaaggaattggag
gagaagcgccgccagtacgaggacgagaaaatgaactgggaggcacaacagcgcatattg
gagcagcagaagctagatgtttccaggaccttggaaaagaacaaaaagaaggggaagatc
ttttaa
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