Polyodon spathula (Mississippi paddlefish): 121315588
Help
Entry
121315588 CDS
T07273
Name
(RefSeq) trifunctional enzyme subunit alpha, mitochondrial-like isoform X1
KO
K07515
enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.211
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00062
Fatty acid elongation
pspa00071
Fatty acid degradation
pspa00280
Valine, leucine and isoleucine degradation
pspa00310
Lysine degradation
pspa00380
Tryptophan metabolism
pspa00410
beta-Alanine metabolism
pspa00640
Propanoate metabolism
pspa00650
Butanoate metabolism
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
Module
pspa_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
pspa_M00085
Fatty acid elongation in mitochondria
pspa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
121315588
00650 Butanoate metabolism
121315588
09103 Lipid metabolism
00062 Fatty acid elongation
121315588
00071 Fatty acid degradation
121315588
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121315588
00310 Lysine degradation
121315588
00380 Tryptophan metabolism
121315588
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121315588
Enzymes [BR:
pspa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
121315588
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
121315588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
121315588
NCBI-ProteinID:
XP_041105750
LinkDB
All DBs
Position
5:complement(13577111..13598721)
Genome browser
AA seq
766 aa
AA seq
DB search
MASVRAAGIISRFSTKTRYSLFTGYTCRHFTVYSAMLVRTHVNYEVKGDVAVVRFNSPNS
KVNTLSQQLHSEFTQVMSEVWANGAVKSAVLISSKPGSFISGADINMIEACSSAAEVTSL
SQEGQRMLQKIEQSPIPIVAAINGSCLGGGLEVAIACQYRVATKNKKTVLGTPEVMLGLL
PGAGGTQKLPKMVGIPSAFDMMLTGKNIRADKAKKMGLVDQLIDPLGPGLKGPEERTMEY
LEEVAIECAKGIANKKISLKKEKGVMQRLTDYVMGIPFVRKQIYNTVQTKVMKQTKGLYP
APLKIIEVIQTGIEQGSDAGYLAESQKFGELAMTRESKALIGLYHGQVACKKNKFGTPQK
EVQRLAILGAGLMGAGIAQVSVDKGLHTILKDTTEEGLSRGQQQIYKGLNDKTKKRSISS
FERDSIFSNLTGQLDYSGFNKADMVIEAVFEDINIKHKVIQEVEAVIPPHCVFATNTSAL
PIKDIASVSKRPDKVIGMHYFSPVDKMQLLEIVTTDKTSKDTTASAVAVGLKQGKVIIVV
GDGPGFYTTRCLAPMLAEAVRALQEGVDPKKLDALTTGFGFPVGAATLADEVGIDVAAHV
AEDLGKAFGSRFGGGNVEVLKTMVAKGFKGRKSGKGCYVYQEGTKNKSVNPGVEEILEKF
KIPVNPEVAKDGDVQYRLVSRFVNEAVMCLQEGILANPVEGDIGAVFGLGFPPCLGGPFR
FVDSYGADKLVEKMRKYEHVYGNQFTPCQLLLDHAKDASKKFHKFS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgttcgggctgcagggattatctccaggttttcaactaaaacaagatactcg
ctttttacaggttacacatgccgtcatttcacagtttattctgccatgctagttcgaact
catgtcaactatgaggtcaaaggtgacgtggcagttgtacggtttaacagccctaactcc
aaggtaaacactttgtcccaacaactccattctgagtttactcaagtaatgagtgaagtc
tgggccaatggtgctgtcaagagtgctgtcttaatttcctcaaaaccgggctccttcatt
tcaggggcagatatcaacatgattgaagcttgcagtagtgctgcagaggtgaccagcctt
tctcaagaaggacagagaatgttgcagaagattgaacaatcccccatacccattgtagct
gctattaatggctcctgtttgggaggaggcttggaggttgcaattgcatgccaatacaga
gtagcaacaaagaacaagaaaaccgtcctgggtactcctgaagtcatgctcggtttactt
cctggagctggtggcacccagaaactaccaaaaatggttggcattccctctgcctttgac
atgatgttgacaggcaagaatatccgtgcagacaaagccaaaaagatgggtcttgttgat
cagcttattgacccactaggtcctggtttgaagggtccagaggagagaactatggaatac
cttgaagaggttgctattgaatgtgctaaaggaatagccaataaaaaaatatctctcaag
aaggaaaagggtgtaatgcagaggttgacagactatgtcatgggtattccatttgtaagg
aaacagatatacaatactgtacagacgaaagttatgaaacagaccaaaggactgtaccct
gctcctttgaaaattattgaggttatacagactggaattgaacagggatcggatgctggc
tatttggctgaatcacagaaatttggtgaactcgcaatgaccagggaatccaaagccctt
attggcctctaccatggtcaagtagcatgcaagaaaaacaaatttggaacaccacagaaa
gaggttcagagactggccattttgggcgcaggtctgatgggagctggtattgctcaagtc
tctgttgacaagggcttgcacaccattctgaaagatactacagaggaaggcttgagcaga
ggccaacagcagatctataaagggttgaatgataaaactaagaagagaagtatctcttcc
tttgagagagacagtattttctcaaaccttaccggacaacttgattacagtggttttaat
aaggcagacatggttattgaggctgtgttcgaggacatcaatataaaacacaaagtcatt
caagaagttgaagcggttattccccctcattgtgtttttgccacgaacacatccgctctg
cccatcaaagacattgcttcagtcagcaaaagaccagataaagtaattgggatgcactac
ttctctccagtagacaaaatgcagctgctggaaatcgtcaccactgacaaaacgtctaaa
gacacaactgcctctgctgtggctgtcggccttaaacaaggaaaagtcatcattgtagtg
ggggacggtcctggcttttatacaaccagatgtctagctcctatgttggctgaagctgtt
agagccctgcaggaaggtgtcgaccctaagaaactggatgccctcacgactggctttggg
ttccctgttggcgctgccactcttgctgacgaagtaggaatcgacgttgctgctcacgta
gcagaggacttgggaaaagcatttggctcccgatttggtggaggcaatgttgaagtactg
aaaaccatggtagcaaaaggattcaaaggccgcaaatctggaaaaggatgctacgtctat
caagaaggcacaaaaaacaaaagtgtgaatccaggagttgaggagattttggagaagttt
aagattccagtaaatcctgaagtagccaaagacggtgatgtccagtatcgcctggtttcc
aggtttgtgaatgaggcagtgatgtgcctgcaggaaggaattcttgctaacccagtggaa
ggagatattggggcagtctttggcttgggattcccaccatgtctgggaggtcctttcaga
tttgttgactcctatggagcagataaacttgttgagaagatgagaaagtatgagcatgtc
tatggaaatcagttcacaccgtgccaattgctgcttgaccatgccaaggatgccagcaag
aaatttcacaaattttcatag
DBGET
integrated database retrieval system
