Polyodon spathula (Mississippi paddlefish): 121316349
Help
Entry
121316349 CDS
T07273
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121316349
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121316349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_10
zf-Nse
U-box
zf-RING_5
zf-rbx1
zf-ANAPC11
Fib_alpha
DUF4200
DUF1664
zf-C3HC4_5
Phlebovirus_NSM
DUF6376
AAA_11
Prok-RING_4
Mitovir_RNA_pol
End3
Motif
Other DBs
NCBI-GeneID:
121316349
NCBI-ProteinID:
XP_041107350
LinkDB
All DBs
Position
5:complement(78022632..78026864)
Genome browser
AA seq
472 aa
AA seq
DB search
MAANASGLEEELSCAVCCEIFKDPVTLHCNHSFCKACLDQWWKEKGARECPVCRRRASIR
DPPVNFALRNIAECFLKEHSQKPPGMLCSVHDEKLKLFCVDDEEAVCLVCQTSEKHENHK
LRPVQEAARNYKGELKTALEPLQDKLKTFNKVKEECDETAEHIKKQAQQTERQIKEEFEK
LHQFLQDEEKARIAALRGEEERKGRIMKEKIENITREISSLSDTIRVIEQELEAEDIFFL
QNYRKTKNRAERTLQDPQCVSGALIDVAEHLGSLKYKGWEKMLGIVQYTPVTLDPNSAAP
WLILSEDLTSVRVSDEKEQLPHNPERFYPCVCVLGSEGFTSGKHCWDVEVGNKTAWDLGV
TNESSQRKGSITVNPGAGYWIIALTDGDQYWACTSPWTQLTVEKKPQKIRVQLDCDRGEV
AFFDSSDMRPLYTFKHRFTERMFPYFSPCLNEDGKNRAPLRVCPVKAVIKVD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaacgcttctggtctggaagaagagctttcctgtgctgtgtgctgtgagatt
ttcaaggatcctgtaactcttcattgtaaccacagcttctgtaaagcatgtctggatcag
tggtggaaagagaagggagctcgggagtgtccagtgtgcaggaggagggcttcaataagg
gatcctcctgtcaattttgctctcaggaatattgcagagtgcttcttaaaagaacacagt
cagaaacctcctggaatgctctgcagtgtgcatgatgagaaactgaagctgttctgtgtg
gatgatgaagaggctgtctgtcttgtgtgtcaaacttcagagaagcatgaaaatcacaag
ctccgtccagtccaggaagctgcacggaattacaagggagagctcaagactgcgctggag
cccttgcaggacaagctgaaaacctttaataaagttaaagaagaatgtgatgaaacagca
gagcacatcaagaaacaagcccagcaaacagagaggcagataaaggaggagtttgagaaa
cttcaccagtttctacaagatgaagaaaaggccaggattgctgcactgaggggggaagag
gaacgaaagggaagaatcatgaaggagaagattgaaaatattacaagagaaatctcatcc
ctttcagacacaatccgagtgatagaacaggagctggaagctgaagacatcttcttcctg
cagaattacagaaaaactaagaacagagccgagcgcacactgcaggatccacagtgtgtt
tcaggagcgctgatagatgtagccgagcacctgggctctctgaagtacaaagggtgggag
aagatgctggggattgttcaatacactccagtgactctggatcccaactctgcagcaccc
tggctcatactgtctgaggatctaacaagtgtgagagtcagtgatgagaaagagcagctt
cctcacaacccagagcggttttatccctgtgtttgtgtgctgggctctgagggattcact
tcagggaaacactgctgggatgttgaagttggaaacaaaactgcctgggatctgggtgtg
acaaacgagtccagccagaggaaagggagcatcactgtgaacccaggagcaggatactgg
attatagccctgacagatggggatcagtactgggcatgcacctcaccatggacacaactc
actgtggagaagaaaccccagaagatcagagttcagctggactgtgacaggggggaggtg
gcattctttgactccagtgatatgagacctctctacacttttaaacacagattcactgaa
aggatgtttccatatttctctccttgcttaaatgaagatgggaaaaaccgtgcccccctc
agagtgtgccctgtgaaggcagttataaaagtggactag
DBGET
integrated database retrieval system
