Polyodon spathula (Mississippi paddlefish): 121316630
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Entry
121316630 CDS
T07273
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121316630 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121316630 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121316630 (lhcgr)
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
121316630 (lhcgr)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
Motif
Other DBs
NCBI-GeneID:
121316630
NCBI-ProteinID:
XP_041107605
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Position
6:5882941..5908222
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AA seq
727 aa
AA seq
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MAASRFILSVNIHSSLTSLSLVCPDVCRCTNKTLRCNAETEALLPAARDAYRRLTLTHLP
LKVIPSLAFEGLSSVFRIEISQSDLLERIESRAFNSLHNLSEISIQNTKSLVDITQEAFK
DLPKLRYLSICNTGIRTFPDLTKIFSAVSNFFLEIRDNLHIKAIPPNAFLGLAKESVTMK
LCNNGLREIQSHAFNGTKLDTLELKDNKHLRVMHRDALKGATGPDVLDVSSTALEYLPTC
GLESVHILIARSSYSLKKLPPFSVFVNLHEAYLTYPSHCCALQNWRIKTQSSLIASWTNL
SRQCEEERSMSEYISIPTNGRSSSPVVTQFPITSESRSPTENFSTFSEEELEMLDFHYPE
LDFCQTEIKLQCTPEPDAFNPCEDIMGYAFLRVLIWFINLLAIMGNLTVLLVFMTSQHKL
TVPRFLMCNLAFADFCMGVYLLLIATVDYRTRSQYNHYAIEWQTGPGCSSAGFFTVFASE
LSVYTLTVITLERWHTITYAMQLERKLCLRHAVLIMLGGWIFSITMAFLPLLGVSSYRKV
SICLPMDIETSVSQAYIIVILLINVLAFVIICVCYIKIYLAVKNPELVARNTDTKIAKRM
AVLIFTDFTCMAPISFFAISAAFKVPLITVTNSKILLVLFYPINSCANPFMYAIFTKAFR
RDLCVLMSWFGCCKTEANTYKLSIYYSRKNGSSLTANRSSRAVLKMTAFSCQPSPGRQEE
LFCKECE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccagatttattttaagtgttaacatccattcatccttgacttctttgagt
cttgtgtgtccagatgtctgccgatgtaccaacaagactctaagatgcaatgcagagaca
gaggctcttcttccagctgcaagagacgcatataggagactaacattgacccatctccct
ttaaaagttattcctagccttgcttttgaaggactaagcagcgtgtttagaattgagatc
tctcaaagtgacttacttgaaagaatagaatctcgtgccttcaatagccttcacaacctg
tcagaaatctcaatccagaacactaaaagcctggtggacattactcaagaagcattcaag
gatcttccgaagttaagatacctgagcatttgtaacactggaatacgaacattccctgac
ctaacaaagatattttctgctgtgtccaacttttttctggaaattagagacaacttacac
ataaaagcaattccacccaatgcctttttgggactggccaaggagagtgtaacaatgaaa
ctatgtaacaatggcttaagggaaatacaaagccacgccttcaatgggacaaagcttgat
acattggagctgaaagataataaacacctccgagtaatgcacagagatgcgctaaaaggg
gccacggggccagatgtattagatgtttcctcgacagcactagaataccttcccacctgt
ggactggagtctgtccatatactgattgctcgttcttcttactccctgaagaaattaccg
ccttttagtgtatttgtcaatctacacgaagcttatttaacatacccgagccactgctgt
gcccttcagaattggagaatcaaaacgcagagttctttgattgctagttggactaaccta
tccagacagtgtgaagaggagagaagcatgtcagaatacatttcaatcccaacaaatgga
cgatccagctcacctgtggtgactcagttccccattacctcggagtccagatccccaaca
gagaatttctccactttttcagaggaagagctggaaatgttggatttccattatccagaa
ttagacttttgccagactgaaataaaactccagtgcacccctgaacccgacgcctttaac
ccttgtgaagatatcatggggtatgctttcctgcgagtcctcatctggtttatcaacctc
ctcgccatcatgggcaacctgaccgtgctgctggttttcatgaccagccagcacaagctc
actgtcccacggtttctgatgtgcaaccttgcctttgctgacttctgcatgggagtctat
ctgctcctgatcgccacggtggactacagaacgagaagtcagtataaccactacgcgata
gagtggcagaccggccctgggtgcagctcggctgggtttttcacagtgtttgccagtgag
ctctctgtatacacgctgactgtcatcaccctggagaggtggcacacgatcacctatgcc
atgcagctggagcgcaagctctgcctaaggcatgcagtgctgataatgctgggtggctgg
atcttctctatcacgatggcgtttctgcctcttttgggggtcagcagttacaggaaggtc
agcatctgcttgccaatggacattgaaacgtcagtctctcaggcctatatcattgtaatt
ctgcttataaatgtcctcgcctttgtcattatctgtgtctgttatatcaaaatctacctg
gcggtaaagaacccagagcttgttgccaggaatacagacacaaagattgccaaaaggatg
gcggtgctcatcttcacagacttcacctgcatggcgcccatatctttctttgccatttca
gcagccttcaaggtccctttgatcacagtgacaaactctaagatactgttggttttgttt
tatcccattaattcctgtgcaaaccctttcatgtatgccattttcactaaagcctttaga
agggacctttgtgtcctgatgagctggtttgggtgctgtaaaacagaggccaatacgtac
aagttgtccatctattattctcggaagaacggcagctcgctaacggctaacaggagttca
cgggctgtgttaaaaatgacagctttcagctgccagccttccccgggtagacaggaagaa
ctgttttgcaaagaatgtgaataa
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