Polyodon spathula (Mississippi paddlefish): 121320867
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Entry
121320867 CDS
T07273
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121320867 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121320867 (setdb2)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121320867 (setdb2)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121320867 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121320867 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
121320867
NCBI-ProteinID:
XP_041115542
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All DBs
Position
9:complement(41396399..41410162)
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AA seq
780 aa
AA seq
DB search
MGDSLLLQVFRPLVSMKMSLKHTSPQKTEERKGCGEIVHSKYQLSPPPELTVKGDSLTVS
SQDQAFECTEKTEVDKAVRFWNNLIHNANVDFAFQRLYAFLNALNQCIKDGSATDQEYVK
AMNFMLEADIVTDLNGEENAVMKTEADKEISAENAEPNETAEDPVLEEGLVGIKENEPSG
TVTTPLEDLKAPSFPSAVSFQPHACCRTCLPVRPETAEQFRGQNPLKIPLLCHFQRAHAK
ADWRSFQNVSLNVFYKAPCGRSLRDFQELCQYVLETECDFLSLEYFSFNTYVQVYRSAAL
TEPLAFEQDLSRGEELVAVEFHNDVDETKPDTFKYRKDRWPHGCFINGSDSMFVDCCDCT
DGCVDETKCACLKLTAKACALKRNKKKRSGPPPYKYKRLMKPVPSGIYECSAWCRCDLKL
CQNRVVQHGLRVRLQVFKTEETGWGVRCLDDIDEGTFICTYAGKILIEGTEDGFKTNGTE
LEAGHGDADPAGQAIKRKREAASSDDDIEVIEEPQEARECSLPEDLAAPQQSTDSSKDSE
KDAMGIDCGNMSPCLSVIKRPLSRTAMLQARLEKLREEGAIKCHPSSSEDEEDEKVHFSP
RTKVHKKNGPLKSNSPKTRTRSAGLVAKAVAVPDVIQQVVESAAIGQNVTNHSDHERKED
LKLTRVWSLTEERSEAKLEESASGHQKSIDHDPEYHYYLDATEEGNVARFLNHSCYPNLF
VQNVFVDSHNRNFPLVTFFTNRHVKSGTELTWNYKYKAGSTPEKEIECQCEKETCKTKLL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcattacttttacaggtgtttcggccacttgtatcaatgaagatgtcttta
aagcatacatcaccccaaaaaacagaggaacggaaaggctgtggggagattgtacactca
aaatatcagctatctccccctcctgaacttacagtaaagggcgattctttgacagtgtct
tcacaagatcaggcttttgaatgcacagagaaaactgaagttgataaagcagtgcgattt
tggaacaacctaattcacaatgcaaatgtggactttgcatttcaaaggttgtatgctttt
ttaaacgctctcaatcaatgcatcaaggatgggtctgcaacagatcaagagtatgtgaag
gccatgaacttcatgcttgaagctgacattgtaactgatttaaatggtgaagaaaatgct
gttatgaaaacggaggctgacaaagagatcagtgcagaaaatgcagagcctaatgaaaca
gcagaagatcctgtgttagaagagggccttgttggaattaaggaaaatgagccttccggc
acagtcacaactcccttggaggatcttaaagctccaagttttccgtcggctgtttctttc
caaccccatgcttgttgccggacatgcctcccagttaggccggagacggcagagcagttc
agaggtcagaaccccctgaaaatccccctgctgtgccactttcagagggcacacgccaag
gccgactggaggagcttccagaatgtgtcgctgaacgtgttctacaaggccccgtgcggc
aggagcctgcgtgattttcaagagctttgtcagtatgtgctcgaaacggagtgtgacttc
ctgtctctggagtacttctcgttcaacacgtacgtgcaagtctaccggagtgctgcttta
acggagccccttgcttttgagcaggacctgagtagaggtgaggagctggtggctgtggag
ttccataacgatgtggatgagaccaagccggacacgttcaagtacaggaaggacaggtgg
ccccacgggtgttttataaatggctcagacagcatgtttgtggactgttgcgattgtaca
gatggatgcgtggatgagacaaaatgtgcttgcctgaaactaactgcgaaagcctgtgcc
ttgaagcgcaacaagaaaaaacgaagtggcccaccaccatataaatacaaacggctaatg
aagccagtgccttctgggatttacgagtgcagcgcgtggtgcagatgcgacttaaaattg
tgccaaaatcgagtggtacagcatggccttcgagtccgactccaggtgtttaaaacggag
gagaccggctggggagttcgctgtctggatgacattgatgaagggacatttatatgcaca
tatgcaggtaaaattttaatagagggtacggaagatggattcaaaactaatggcacagag
ctggaggctggccatggggatgcagatccagcaggacaggcaataaagagaaaacgagaa
gcagcatcttcagatgacgacatcgaggtgattgaagagccgcaagaggcacgggaatgc
agtctgcctgaggatctcgcagctccccagcaatccactgacagcagcaaggactctgaa
aaagatgctatggggatagattgtggaaatatgtcgccatgcctctctgtgataaagaga
cccctgagcaggacggcaatgctccaggccaggctggaaaagctgagagaggagggtgca
atcaaatgccatcccagcagctctgaggacgaagaagatgaaaaagtgcatttctctccc
agaaccaaagttcataaaaaaaatggtccattgaaatcaaattcacccaagaccagaact
agatcagcaggtcttgtagcaaaggctgttgctgtcccagatgtcatccagcaagttgtg
gaatcggctgccattggacaaaatgtaacgaaccactctgaccatgaaagaaaagaagat
ttaaaattgactcgggtgtggtccctcactgaagagagaagcgaagctaaattagaagaa
agtgcatcaggccaccagaagtcaatagatcatgacccagagtatcattattacttagat
gcaacggaggagggaaatgtagcccggtttcttaatcacagctgttatccaaatctcttt
gtgcagaatgtatttgttgactcgcacaacaggaattttcccttagtgacgttcttcaca
aacaggcatgtaaagtcaggtacagagctaacctggaattataagtacaaggctggaagc
acacctgagaaggaaattgaatgccaatgtgaaaaagagacatgcaagaccaaactgctt
tga
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