Polyodon spathula (Mississippi paddlefish): 121325505
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Entry
121325505 CDS
T07273
Name
(RefSeq) PR domain zinc finger protein 8-like
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121325505
03036 Chromosome and associated proteins [BR:
pspa03036
]
121325505
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121325505
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121325505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
zf-C2H2_4
zf-C2H2
zf-C2H2_9
DUF5810
LIM
Motif
Other DBs
NCBI-GeneID:
121325505
NCBI-ProteinID:
XP_041123967
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All DBs
Position
13:9084618..9089456
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AA seq
520 aa
AA seq
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MEHSYLLKTFWANDNRFLHHHVADLLTSVHVTQDLPKGVTFGPCILQNTFYDTIAFIALK
CSDKISKSYVFRVDAEAIKSSPNVLSWLRLVQAATNNKEQNLEAFLKSGQLYFRSIRSIS
KDEELLVWYDEELSHLLGFNDIKGQTPAEGFRCMICDQPFKNEYPYLAHTRFLCVQGNHF
FHSRELQVRKAMEIKRKKQDITDFHNIARDLEQNKSNTNEDTSNFNDKKRKPDDLDRTKP
YKKSVLLEKRNISNHHNIAFMNRGSQDVPELSASVLKLSADKCLFKKGVSEDKQSAFTEV
RRVKEKMKHEKTHEPVEERGPNQSGQGHLLTGSVLHSSGSAFSFVLPKGAREESAFCKPN
NRLVNDSSMHPPHTLNSSTCLGELSDSITRDNILGYGSLLGTKVLTRDLANSQSLQSTRN
HSFTCPSERWTQQLQTTSSFTLLPSSFTTFGVAAQNWCAKCNLSFRMTSDLVFHMRSHHK
KEFVAEAQIKRRREGKLTCPICQELFRERHHLSRHMTSHN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagcacagctatttgcttaaaacattttgggcaaatgacaacagatttctccatcat
catgtcgcagatctgttaacaagtgtacacgttacacaggatctccccaagggggttacg
tttggaccctgcattctccaaaacactttttatgacaccatagcattcattgctctgaag
tgttccgacaaaataagcaagtcctatgttttcagggtggacgctgaagcaataaaaagt
tctccaaatgttctgtcttggctaagactggtgcaagctgcaaccaacaacaaagaacaa
aatctagaagcgttcttgaaaagcggccagttatattttcggtctatacggagtataagc
aaagatgaagaactgctggtgtggtatgatgaggaactttctcatctcttgggattcaat
gacataaaaggccagacacctgcagaaggttttaggtgcatgatatgtgaccagccattc
aagaatgaatatccatatttggcacacactcgcttcctctgtgttcaaggaaatcatttt
tttcacagcagggaattacaggtccgtaaagcaatggaaataaagcgcaaaaaacaagac
atcaccgatttccataatattgcccgggatctggaacagaacaaatccaatacaaatgag
gacacttccaatttcaatgataagaaaaggaaacctgatgatctggacagaacaaaacca
tacaaaaagagtgttttactggagaaaagaaacatttctaatcaccataacattgctttc
atgaacaggggcagtcaagatgtcccagaattgtcagcttcagttttgaaactcagtgct
gacaaatgtctgtttaagaaaggtgtttcagaagacaagcagagtgcttttactgaggtt
aggagggtaaaggaaaaaatgaaacatgaaaagacacacgagccagttgaggagagaggt
cctaatcaaagtggacagggtcatttactaacaggctcggttttacattcaagtggaagt
gccttttcctttgttttgcctaagggtgccagagaagaaagtgctttctgcaaaccaaat
aatagactggtaaatgactcttccatgcacccaccccacaccttaaacagttccacatgc
cttggggaattgtccgattccattactcgggataatattttgggttatggcagtctcttg
ggaaccaaagtattaacaagggatttggcgaactcacagtcgttgcagtcaacaagaaac
cactcctttacgtgtccttcagaacgctggacccagcagctgcaaaccacttcttccttt
acactgcttccatcttcctttactacttttggggttgcagcacagaactggtgtgctaaa
tgcaatctgtcttttcggatgacgtctgatttggtttttcacatgaggtcccatcacaaa
aaggaatttgtggctgaagcacagatcaagaggaggagagaaggaaaactcacatgtccg
atctgtcaggagcttttcagggaacgtcaccacttgtcaagacacatgacgtctcacaat
taa
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