Polyodon spathula (Mississippi paddlefish): 121330240
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Entry
121330240 CDS
T07273
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121330240
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
121330240
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
Ctf4_C
WD40
ANAPC4_WD40
eIF2A
HMG_box
NBCH_WD40
Tectonin
Motif
Other DBs
NCBI-GeneID:
121330240
NCBI-ProteinID:
XP_041132527
LinkDB
All DBs
Position
17:32831109..32845731
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AA seq
1141 aa
AA seq
DB search
MPAERKPMRYGHTEGHTDVCFDHTGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSM
ALKDGRLVTAVSNNTVQIHTFPDGAPDGILTRFTTNANHVVFSESGTHVAAGSSDFMVKV
IEVSDSSRQKTLRGHNAPVLSVAIDPKDVYLASSSCDGSVAVWKISEQTQVISWNVLQKS
SDVSNAKSICRLTWQPSNGKLLAVPVDKAVQLYERDSWNNVFNLSDDFITQPVNVVSWSS
CGKFLAAGSVGGFMSVWNVETKECLEREKHEKGYTVCGLVWHPSGSQIAYTDTEGCLGLL
DGLSSGVAKTPMTAAAGKEVKDYDDLFDGDDDGLLEEDPSETRSPPKRPLLDDEDEDDLM
PSLSRPRKRGAILDDDNSMDVGSLKLGVGKDGEDDDSASLVQLAPVSSALRPAYEGPLPT
PRQKPFQTGSTPVHLMHRFLVWNSVGIVRCYNDEQDNAIDVEFHDTSVHHAMHLTNSLGY
TLADLSQEAVLLACESTDELASKLQCLHFSSWDTNKEWMVDMPKEEDVQALCLGQGWAAA
ATSALLVRIFSMGGMQREIFSLPGPVVCMSAHGEQLMIVYHRGTGFDGDQSLGVQLLQFG
KRRRQILHGDPLPLSKKSHLAWLGFSAEGTPCHVDSEGVVYMLNRSLGNTWTPVCNTREH
CKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFQLPYCQIATEKGQMEE
QFWRSMLFHNHFDFLAVSGYEFDEAGKSLVQKEQQELLMKMFALSCKLEREFRCVELAEL
MTQSVVTLAIRYASRSKRMALAQRLNELALEKAAEITAQQQEEEEQEDFRSHLNAGYSTT
DSEWSQPRVMNQRRQQQPHAEEEEEEEEEEEDAGAEEETPECEMMEADEVPETKKQRLNP
FGKATSSPEKPAPKPVLKATKEGRVNPFKVAGVVKSPGFTAGQPRTANILDSMAKSTKKP
SALGGQAASKQKSPVLKPLLPKPRTKTQATLFQTGPKTASKKTEEKPSKEEKESRVQSEN
PVHAAAENTENRKPKTGFQLWLEENRKGILADQPDLDEAEIIKEGMVRFRALSAKDRLSL
TEKAKGGAVGDCAEVKKRKRVEGEGGEVLVNETAEGDANSSKKKKPLDTSSKLSAFAFSK
D
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagagaggaaaccgatgcgatacgggcacacggagggacacacagatgtctgc
tttgaccacacaggaaagtacatcgtgacctgcggcagtgacggtgatgtccgaatctgg
gagagcctggatgatgatgatcctaagtccatcaatgtgggagaaaaagcctattccatg
gccttgaaggatgggaggctagtcacggcagtttccaacaacacggttcagatccacact
ttccctgacggggctccggacgggatcctaacccgcttcaccaccaacgcgaaccatgtg
gtgttcagtgagagcggcacgcacgtggctgccggttccagtgacttcatggtgaaagtg
atcgaggtgtcggacagtagtcggcagaagaccctgcgagggcacaacgccccagtcctg
agtgtcgctatcgaccccaaggatgtctacctggcttcttcaagctgtgatggctcagtt
gctgtctggaaaatctcagagcagacccaggtgatcagctggaacgtgttgcagaaatcc
agtgacgtgagcaatgccaaatcgatctgtcgcctgacctggcagccctccaatggaaag
ctgctggctgttcctgtggacaaggctgtgcagctctacgagagagactcctggaacaat
gtgtttaatctttcagatgacttcatcacgcagccggtcaatgtggtctcctggtcttca
tgtgggaagttcctggctgcagggagtgttggtggcttcatgtctgtgtggaatgtggag
actaaggaatgcttggagagggagaagcatgagaaaggctacacagtgtgtggtctggtt
tggcacccaagtggaagtcagattgcgtacaccgatactgagggctgcctgggtctgctg
gacgggttgtcttctggcgtggcaaagactcctatgaccgctgctgctggcaaggaagtg
aaggactacgacgacctgtttgacggagacgatgatgggctactggaagaggacccgagt
gagactcgctcgcctccgaaacgccccctcctggatgacgaggatgaagatgacctcatg
ccatcactcagccgcccccggaaacgcggggccattctagacgacgataactctatggat
gtgggatccctgaagcttggcgtggggaaggacggggaggatgatgacagtgccagcctg
gttcagctggctccggtatcctctgcactccggccagcctacgagggccccttgcccacc
ccccggcagaaacccttccagaccggctccacacctgtgcacctcatgcaccgattcctg
gtgtggaactcggtggggatcgtgcggtgctacaacgatgagcaggacaacgccattgat
gtggagtttcatgacacctctgtgcatcacgctatgcacctcaccaacagcctgggatac
acactggcagacctgtcccaggaggctgtgctgctggcctgcgagagcacagacgaactt
gccagcaagttgcagtgcctccacttcagctcatgggacactaacaaagagtggatggtg
gacatgcccaaggaggaggatgtacaggcgctgtgtctgggccagggctgggctgcagct
gctaccagcgccttgctggtgcggatcttctccatgggcggcatgcagagagagatcttc
agcctgccggggcccgtagtctgcatgtctgcgcacggggagcagctgatgatagtctac
cacagaggcacagggttcgatggcgaccagtccttgggagttcagttgctgcagtttggg
aagaggagacgacagattctgcatggagaccccctccccctctccaagaaatcgcacttg
gcctggctcggcttctctgctgaaggcaccccatgtcatgtggactcggagggggtggtg
tacatgttaaaccggtccctgggaaacacgtggacccctgtttgtaacactagggagcac
tgcaagggcaaatcggaccattactgggtagtgggaatccacgagaacccacagcagctc
aggtgtatcccctgtaaaggtgcccggttcccccccacgctgcctcgccctgctgtcgcc
atcctgcccttccagctgccatactgtcagatcgctacggagaaggggcagatggaggag
cagttctggcgctccatgctctttcacaatcacttcgacttcctggctgtgagcgggtac
gagtttgacgaggctggaaagagcctggtgcagaaagaacagcaggagctgctcatgaag
atgtttgcactgtcgtgtaagctggagcgggagttccgctgtgtggagctggcagagttg
atgactcagagcgtggtgactctggctatccgctacgcctcgcgctccaagcgaatggcg
ctcgctcagagactcaacgagctcgccctggagaaggcagctgagatcaccgcccagcaa
caggaagaggaggagcaagaggacttccgcagccatctgaatgctggttacagtacaact
gactcagaatggagtcagcctcgagttatgaaccagaggcggcagcagcagcctcatgcg
gaggaggaggaggaggaggaggaggaggaggaggatgcaggagctgaggaagagacacct
gagtgcgagatgatggaggcggacgaagttccagagacaaagaaacagaggctgaatccc
ttcggcaaagccaccagttcacctgaaaagccagctccaaagcctgtgctgaaggccacc
aaagaaggacgagtcaacccttttaaggtcgcgggtgttgtgaagtcccctggcttcact
gctggacagccccgcacagcaaacatcctggacagcatggccaaatccaccaagaagcca
tctgccctgggcggccaggcagccagcaaacagaaatcacctgtgctgaagcctctgctg
cccaaaccgaggaccaagacccaggccacattatttcagacgggtcctaaaactgcaagt
aaaaagacagaagaaaaaccaagcaaagaggaaaaggagagcagagttcaatcagagaat
cctgtccatgctgctgctgaaaacacagaaaatagaaagccaaagacgggcttccagctg
tggctggaggagaaccggaaggggattctggcggatcagcccgatctggacgaggctgaa
atcatcaaggagggaatggtccgcttccgggcgctgtctgccaaagacaggctgtccttg
acagagaaggcgaaaggaggagctgtgggagactgtgccgaggtgaagaagagaaagcga
gtggagggagaaggtggagaggtactggtgaacgagactgctgaaggggacgcaaattca
tccaagaaaaagaaaccactggacacttcctccaagctctctgcgtttgcattcagcaag
gattga
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