Polyodon spathula (Mississippi paddlefish): 121331021
Help
Entry
121331021 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121331021
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121331021
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121331021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
121331021
NCBI-ProteinID:
XP_041134053
LinkDB
All DBs
Position
18:complement(1337797..1345676)
Genome browser
AA seq
902 aa
AA seq
DB search
MASKTVKDTERSCVLCCQEIEIFALGKCDHPVCYRCSTKMRVLCEQKYCAVCREELDKVL
FVKKRDPFSTIATQHFQCEKKHDIYFSDAEIHTQFRQILQHKCPQCPESRVFTKFEELEH
HMRKQHELFSCKLCAKHLQIFTHEREWYNRKELARHRTQGDLDDTSHRGHPLCKFCDDRY
LDNDELLKHLRRDHYFCHFCDSDGAQEYYSDYDYLREHFREKHYLCEEGRCSAEQFTHAF
RTEIDYKAHKAACHSKSRAEARQNRHIDLQFNYASRHSRRSEGIVGGEDYEEVDRFNRHS
RAERGGGGGGGGRGGQQNRRGSWRYNREEEDREVAAAVRASVAARRQEEKRPAQEREISK
PKEEATEAEDFRHAKAPAKPASEAAGAKDAAKPVNNNGPLKGEEFPALGAMTTPIPSTNT
AAAVKLKEEDFPSLLSKSVSSPMTPAYTAQPRKPSAFQEEDFPALVSKIRAPKQCGSATS
AWSTSSNKNAGRPSPAASPFPSFNTPTPSSSASTQPRKKTLPASNSKSNPRNKLSPASDE
DDDRSGKTTQEIRSVPTMLDISSLLTGRSAPPASMPQTVSKVGKRKKMGVGKQSPAFTAS
LTPPPMATTANVDQKENVPEIKQPPSKITQPASKATSKTNLINGHSEQPAENSTLVTKEP
PGLKKQLASEPCPLPEEEFPALLPKKTPPGFNTVFAMKGGYSSLSPPPPPGLAAAPSKPP
PGFTDIALNANLLEPTLPTVNEPAFTAGTYLVPENFQFRNMELIQSIKNFLLDEESKFNQ
FKTFSGQFRQGHMSAVQYHQSCRELLGENFKRIFNELLVLLPDTSKQQELLAAHNQCQAS
NKPKKNKKNAWQTGNNNNLELDCRICPFCRQVLTEKDFITHKSQHRQDDDFPSLQAISKI
AS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaagactgtcaaggataccgagcgaagctgcgtgttgtgttgccaggagata
gagatattcgccctggggaaatgtgatcacccggtgtgctaccgctgctccaccaaaatg
agggtgctgtgcgagcagaagtactgcgccgtctgccgggaggagctcgacaaggttctt
tttgtaaagaaacgtgacccattttcaactatagcaacccagcattttcagtgtgagaaa
aagcacgatatttacttcagtgatgcagagatccacacgcaattcaggcagattttacaa
cacaaatgtccacaatgcccagagtcgagggtcttcaccaagtttgaagaactggaacac
cacatgagaaaacagcacgagctgttcagctgcaaactctgtgcaaagcatctccagatt
ttcactcatgaacgcgagtggtacaatcgtaaggagctggctcgtcatcgcacgcaaggg
gacctcgatgacacctcccaccgcggacaccctctctgcaaattctgtgacgaccgctat
ctggacaacgatgagctgctcaaacacttgaggagagatcactacttctgtcatttctgt
gattcagatggtgctcaggaatactacagtgattatgactacctacgagaacatttccgt
gagaagcattacctgtgtgaggagggcaggtgcagcgctgagcagttcacccacgctttc
cgcacagagatcgattacaaagcccacaaggcagcctgccacagcaagagcagggcagag
gctcgtcagaaccggcacatagacctgcagtttaactacgcgtcccggcactcacggagg
agtgagggtatagtaggaggggaggattatgaagaagtagatcgctttaacagacactcg
agggcagagagaggaggaggaggaggcggtggcggccggggagggcagcagaacaggaga
ggcagctggaggtacaacagggaggaagaggaccgggaggtggcagcagcggtgcgagcg
tcggtggcggcgcgcagacaggaagaaaagagaccggcacaagagcgagagatctcaaaa
cctaaagaagaggccacggaggctgaagacttccgtcatgcaaaagcaccagccaagcca
gccagcgaagctgcaggtgccaaagatgctgctaaaccagtaaacaataatggtcctcta
aagggtgaagagttccctgcattgggagcgatgacaacacctattccaagcactaataca
gcagctgctgtaaaactgaaagaagaagacttcccaagtctgctgagcaagtctgtatcg
tccccgatgaccccagcgtacactgcacagccccggaaaccttctgcattccaggaggag
gatttcccagcactggtatccaaaatcagagctccgaaacaatgcggcagcgctacctct
gcctggtccacctcctccaacaagaacgctggcagaccaagccccgctgcctcccccttc
ccctccttcaacacccctacccccagctcttcagcgtccactcagccaaggaagaaaacc
ctgccggcaagcaatagtaaaagcaacccaaggaacaagttatctcccgcttctgatgaa
gacgatgaccgcagcgggaagaccactcaggagatccggagcgtgccgaccatgctggat
atctcctctctattaacagggagatcggctcccccggcgtcgatgccccaaactgtttcc
aaagttggcaaaagaaagaagatgggcgtggggaagcagagcccagccttcactgcatcg
ctgactcctcctcctatggcaacgacagctaacgtggaccagaaggagaatgtcccagag
attaaacagccgccttcaaaaatcacacagcctgccagtaaagcaacttccaaaacaaac
ctgatcaatggtcattctgaacagcctgcagagaacagcacgctagttacaaaggagccg
cctggactcaaaaagcaactggcatcagagccttgcccgctgcctgaagaagaattccct
gctctgctgcctaaaaaaactcccccaggttttaacacagtgtttgcaatgaagggaggg
tactccagcctttcccctcctccacccccgggactagcagctgccccgagcaaacctcct
cctggattcactgacattgctttgaatgcaaatttattggagcctacccttccaacagtc
aacgaaccagcatttacagcagggacctacctcgtgcctgagaatttccagttcaggaac
atggagctcatccagtctataaagaacttcctgctggatgaggagtctaagttcaaccaa
tttaaaactttctctggacagtttagacaaggccacatgtctgcagtacagtaccaccag
agctgcagagagctgctgggagagaacttcaagaggatattcaacgagctgctggtgctt
ctgcctgacacgagcaagcagcaggagctgcttgctgctcacaaccaatgccaggcctcc
aacaagcccaaaaagaacaagaagaatgcttggcagacaggcaacaacaacaacctagag
ctggactgtcggatctgccccttctgcagacaggtcctgacagagaaggacttcatcacg
cacaagagccagcacaggcaagacgatgacttcccttctctccaggccatcagcaagatc
gcgagctag
DBGET
integrated database retrieval system
