Paenibacillus spongiae: L1F29_10390
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Entry
L1F29_10390 CDS
T09530
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00300
Lysine biosynthesis
pspn00550
Peptidoglycan biosynthesis
pspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L1F29_10390
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L1F29_10390
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
L1F29_10390
Enzymes [BR:
pspn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
L1F29_10390
Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
Precursor biosynthesis
Amino acid ligase
L1F29_10390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UVI32192
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Position
2281019..2282506
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AA seq
495 aa
AA seq
DB search
MRLDQLAALLETAVVAGDGHKEITGIQTDSRKVSEGDLFICLVGHNMDGHDYAQEALKRG
AKALVVQRKLDVDAPQIIVKDSRFAMAVMADEYFGHPSRSLKLIGITGTNGKTTTTYLIE
RILADAKHRPGVIGTVEMRYGGKTYPMSGTTPEALELQRYLAAMVAEGTDYCAMEVSSHA
LEQGRVKGCRYRTAVFTNLTQDHLDYHGTMERYAAAKGLLFGRLGNDCGASQDERSYAVL
NADDPASEAFARLTAAEVLTYGVKQEADVRASDIKITVHGTSFHVTTFRGEADITLRMAG
TFNVYNALAAITAALVENIPLEQIKQSLEAVPGVPGRVEAVHAGQPFAVIVDYAHTPDGL
DNVLKAVKEIASGRIICVFGCGGDRDRTKRPIMGRIAAAYSDYVIVTSDNPRTEDPIRIL
ADIEAGLQNDGVPQERYELQPDRRLAIQKAVEMASHEDVVLIAGKGHETYQIIGSVTHDF
DDREVAKEAIRSLEK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggatcaattggcggcgctgctggaaacggcggtagtcgcaggtgacggccat
aaggaaataacagggatccagaccgattcccggaaggtgtcggaaggcgacttgtttatt
tgcctggtcggccataatatggatgggcatgattatgcacaggaagcattgaagcgcggt
gcgaaagcactcgtcgtccagcggaagctcgatgtcgacgccccccaaatcatcgtgaag
gacagccgtttcgcgatggcagtcatggccgatgagtatttcggccacccgagcaggtcg
ctcaagctgatcggaattacggggacgaacggcaagacgaccacgacttatttgatcgaa
cgaatactggccgatgccaagcaccggcccggtgtgatcggcacggtcgaaatgcgatac
ggcggaaagacctaccccatgtccggcacgacgccggaagcgcttgagctgcagcgttat
ctcgcggcgatggtcgcggaggggacggattattgcgcgatggaagtatcttcgcatgcc
ctggagcagggaagggtgaagggatgccgttaccggacagccgtctttacaaacctgacc
caggaccatctcgattatcatggcacgatggagcgttacgccgcggccaaggggcttctg
ttcggtcggctcgggaatgattgcggagcatcgcaggatgaacgctcgtatgcggtgctg
aatgcggatgatcctgcctcggaggcattcgcccgcttgaccgctgccgaggtgttaacc
tacggggtgaagcaggaagccgacgtccgcgcgtccgatatcaaaattaccgtacacggg
acctcgttccatgtaacgaccttccggggcgaggcggatataacgctgcggatggcgggc
accttcaacgtctataatgcgcttgcagctattaccgccgcgctggtggagaatattcct
ctggagcagatcaagcaaagtttggaagccgttccgggtgttccgggccgtgtggaagcc
gttcatgccggacagccgttcgcggttatcgtcgattacgcgcatacgccggacggactg
gacaatgtgctgaaagccgtcaaggagatcgcttccgggcggattatatgcgtgttcggc
tgcggaggcgaccgcgaccggacgaagcgcccgattatgggccgcattgctgcagcctac
tccgattatgtcatcgtaacgtcggataatccccggaccgaggatccgattcgcattctc
gccgacattgaagccggacttcaaaatgacggcgtaccgcaagaaaggtatgagctgcag
cccgaccgccgcttggcgattcaaaaagcggttgaaatggccagccatgaagatgtagta
ttaattgcgggcaagggacacgaaacgtatcaaatcattggcagcgtaacgcatgatttc
gatgaccgggaagtggccaaagaagcgataaggagtctggaaaagtga
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