Punctularia strigosozonata: PUNSTDRAFT_112389
Help
Entry
PUNSTDRAFT_112389 CDS
T03131
Name
(RefSeq) Sec63-domain-containing protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_112389
Enzymes [BR:
psq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PUNSTDRAFT_112389
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PUNSTDRAFT_112389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
nSTAND1
Motif
Other DBs
NCBI-GeneID:
18876459
NCBI-ProteinID:
XP_007382067
JGI:
112389
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MLGFDNLDLVANLLEERSTILAEAQRRHIEETLKANASRPLWTGVAAPAPEVLPHVYTSA
LMVQGNVLSQYGSKYTLPIGTTRHDHEDYEEVIIPPAKPVPPRATERLMRVDELDELCKG
SFPGYESLNRIQSIVYPTAYGSNENMLGKTDVAMLTVLRVLDQNRNKECIKPSSLAWTIN
KGDFKIIYVAPMKALASEITRKLGKRLKWLGINVRELTGDMQMTRQEVSETQIIVTTPEK
WDVVTRKPTGEGEIASKVKLLIIDEVHLLNDERGAVLETIVARTLRQVESTQSVIRIVGL
SATLPNYVDVAEFLSVSKQTGLFYFDSSFRPVPLEQHFIGIRGKSGSALQRKRLDQTTYH
KVEELVNRGHQVMVFVHARKETVKSALALREAALAEGILEHFSCEDHPHWSKFRSDIGQS
RNKEMKQLFDNGFGIHHAGMLRSDRNMMERMFEARAIKVLVCTATLAWGVNLPAHAVIIK
GTQVYNSSKGSFADLSVLDVLQVFGRAGRPGLEDSGEGYICTTDDKLDHYLNAVTSQNPI
ESQFTAGMVDALNAEVALGTVASEADAIQWLGYTYLFVRMRKNPSQYGLPREEPADDPQL
INKRRQLVTSAARQLQEARMVAYDDQKGTLTITDLGRIAARYYIRVASIEIFHKHFKAEM
TEADVLVMLSMSTEFDQIQLRESEIEELERLNEGIPCDVNLKNSGPSIDNSQAKVNILLQ
AYISNAYVDDFALVSDMAYVAQNAGRIVRALLEMAISRKWASVSATLMGMSKAIEKRMWP
FEQPLKQFPLKAEVLYGLTQYADQYTPAELSQMQAAELGQLIHLNERHGAALLSAAQQFP
TARITYRLRPLGFDILRIATGIERAFSWATKLHGSAEPFWIWVEDEEGVFIHQSAYLTFR
EGSSYLNADFIIQIPLGQVPSSVTIRFVSDRWMGAEEEVRVPLDTLAMPTPFNGHTRRLD
LPFLGPSICGYPPLQRALTRRLSSFNAIQTQVAWSLLQTRQHSLLCAPAGSGKSSMSHAS
ILHTLVQVPDTWALLVSPTRSSALEATSDLRRLSADLGISVELIQDTSVFSDVERTTIRV
VTAGPLLEAFSRQPPRQLLASLRLVVLENLEELDPTYELAIAELRHASCSTATRFIGVSN
SLADPRDVASWLDVDPFALHSFRPRDRDQALSQNIQSFNIPQPAALIKAMAKPAHAAICE
ASTNDGAIVFVPSRGQCRSIATDLNTQATLKNPTGRGYLTAHVSDNHLEYWKALLQDKTL
YDLISRGIGIFHDGIHKADRKLMLDLYIEGHLRVLIIPREACRTVPIRAAVVVVMGTQSI
QYDPSTRKRHTTEYSVQDIVRMQGLAVRHNLSGHFYLFCHTESKDAYTRFLEDGIPLESR
LLETDHLQKWYRSRKQAGTITDKDQGVKALSWTLLTRRIASNPAYYDIESYSGNDNLSRI
IDKLDEASMSAP
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtttcgataatctagatcttgtagcgaacctgttagaagagcgttctactatc
cttgccgaggcacaacgaaggcacatcgaagagactcttaaggcaaatgcctctaggcct
ctttggacaggtgtggccgcccccgcccctgaggttctgcctcatgtgtacacttctgcc
ttgatggtgcagggtaatgtactctcccaatacggtagcaaatatacgctcccgattggt
actacgcggcatgatcatgaggactacgaggaggttataatacccccagccaagcctgtg
ccgccgcgagcaacagaaaggctaatgcgtgtggatgagttggatgaattgtgcaaagga
tcgttccccggttatgagagtctgaatcgtatacagtcaatcgtgtaccctacagcctac
ggttcgaacgagaatatgttgggcaaaacagatgtagcgatgttgactgtccttcgtgtg
cttgaccaaaatcggaacaaagaatgcatcaaaccgagctcacttgcttggacgatcaac
aaaggagacttcaagatcatttacgttgctcccatgaaagctctcgcatccgagatcacg
cggaagctcggtaaacggctcaagtggctgggtatcaatgttcgagaactgacgggtgat
atgcagatgacaagacaagaagtttctgaaacccagatcattgtgaccacgcctgagaaa
tgggatgtggttaccaggaagcccacgggagaaggagagattgcttcaaaagtcaaactc
ctgattatcgacgaggtccatttgcttaatgacgagcgcggggcagtgctcgaaaccatc
gtggctcgcactctgcggcaggtcgaatcaacccaatcggtcattcggatcgttgggctt
agtgccactcttccaaactatgtcgacgtcgccgaattcctgagtgtctccaagcaaacg
gggctcttctatttcgactcctcctttaggcctgttccactcgagcaacatttcattggc
attcgcggcaaatctggcagcgccttgcaaaggaaaaggctcgaccaaaccacctatcac
aaagttgaagaactcgtcaaccggggccatcaggtcatggtcttcgttcatgctcgtaaa
gaaacagtcaagtccgcgctggcgctacgggaggcggctttggcggagggaatcctggaa
catttcagttgcgaagatcatcctcattggtcgaaatttcggagcgatattgggcaatca
agaaacaaggagatgaagcaactgtttgacaacggctttggtattcatcatgccggcatg
cttcggtccgatagaaatatgatggagcgcatgtttgaagctcgggcgataaaggtttta
gtatgtactgcgacccttgcttggggcgtgaacctgcctgcacatgcggtcatcatcaaa
ggcactcaggtgtacaatagctccaaaggttcttttgcggacctatcagtactggacgta
ctgcaggtattcggacgtgctggtcgtcccggactggaagatagtggcgagggctatata
tgtaccacggacgacaaactggatcactatctgaacgcggtcacgtcgcaaaatccaatc
gagtcacagttcacagcaggcatggtggatgctctgaacgccgaggttgctcttggcacc
gttgccagcgaagctgacgcgatacagtggctcggctatacgtatttgttcgtacgaatg
cgcaaaaacccgtcccaatacggtttaccccgtgaggagcctgcggacgatcctcagcta
atcaacaagcggaggcaacttgtaacaagcgctgctcgccaacttcaggaggccagaatg
gtggcttacgatgaccaaaagggcacattgaccattacagaccttggcaggattgccgca
agatattacatcagggttgcttcaatcgaaatattccacaagcatttcaaggccgagatg
acagaggctgacgtcctagtgatgctcagcatgagtaccgaatttgaccagatacaattg
cgggaatcagaaatagaggagctggagagactgaatgagggcataccttgcgacgtcaat
ctgaagaatagcggccccagcatcgacaatagtcaggccaaggtcaacatcctccttcaa
gcctacatttcaaacgcatacgttgacgattttgcactggtctctgacatggcctacgtt
gcccaaaacgcgggtcggattgttcgcgcccttctcgaaatggcaattagccgcaagtgg
gctagcgtcagtgccacgctcatgggcatgagtaaagccatcgaaaaacgcatgtggcca
ttcgagcagcccctcaaacagttcccactcaaggcggaagtattgtacggattaacccag
tatgcggaccagtatacccccgcagagctatcccagatgcaagcagcggaacttggtcag
ctcatccatctcaacgaaaggcatggagcggctctcctgtctgcagcgcagcaatttcct
acagcgcgcattacctacagactccgacctcttggatttgatatcttgagaatcgctacc
gggatagagagagcctttagttgggcaacgaaactccatggctcggcagaacccttctgg
atctgggtggaagacgaggagggtgttttcatacaccaatccgcatatcttacttttaga
gaagggtccagctatctgaatgcggatttcatcatacaaattcctctcggtcaagtccca
tcgtcagtaacaattcgcttcgtgtcggacaggtggatgggggcggaagaggaagttagg
gtcccgctggacacgctagcgatgccaaccccgttcaacggccacacccgtcgcttggat
ctcccgtttcttggtccttcaatttgtggttaccctccgcttcagcgtgcgctcactcgt
cgattgtctagcttcaatgctatacagacacaagtggcttggagccttctacaaacgaga
cagcactcgttgctgtgcgcaccagccggtagcggcaagtcttcaatgtcgcacgcctcg
attctgcataccctagttcaagttccggatacgtgggcattgctcgtgtctccgacaagg
agttctgctttggaagcgacatcggacttacgacgactgtctgctgatctgggaatatca
gtagagctcatccaggacacatccgtattctccgatgtcgaaaggacaacgattcgcgta
gtaactgcaggacccctattggaagcattctcgcgtcaaccaccgcggcaactgttggcc
tccctccgtctggtcgtacttgagaacctcgaagaactcgaccccacgtacgagctcgcc
attgccgagctacgtcacgcgagttgttcaacggcgacacgatttatcggggtgtccaat
tccttggcagatcccagggacgttgcaagctggcttgacgtcgacccgttcgcgctgcac
agtttccgaccccgagatcgtgatcaggcactcagccagaatatccagtccttcaacatc
ccgcagcccgctgctctcataaaggccatggcaaaacccgcgcatgcagctatctgcgag
gcatccactaacgatggagctatcgtatttgtaccttctcgcggacaatgcaggtcaatc
gcgacggatctcaatactcaggcgacgctgaagaacccgaccgggcgagggtacctgaca
gcacatgtctctgacaaccacctggagtactggaaggcacttttacaagacaaaacattg
tacgacctcatcagtcgaggaatcgggatcttccatgacggcatccacaaggcggatagg
aaactgatgctcgatctctacattgaagggcacctgagggtcctcatcataccgcgcgag
gcatgccgcactgtcccaatccgtgcagccgttgtggtcgtcatgggaacacagtctatc
caatacgatccgtccactaggaaacgccacacaacggaatacagtgttcaggatatcgtg
cggatgcagggacttgctgttcggcacaacctatccggtcatttttacctcttttgtcac
accgagagcaaagacgcctataccaggttcttggaggatggaatacccttggaatctagg
ctacttgagacagatcaccttcaaaaatggtataggtcccgtaaacaggcgggtacgata
acggacaaagatcaaggagtgaaagcattaagctggactttgctcacgaggcgtattgca
agcaatcctgcttactatgatatcgaatcctactccggaaacgacaacttgtcacgcatc
atagacaaattagacgaagcatcaatgtcagcaccatag
DBGET
integrated database retrieval system
