Punctularia strigosozonata: PUNSTDRAFT_143337
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Entry
PUNSTDRAFT_143337 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
psq
Punctularia strigosozonata
Pathway
psq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUNSTDRAFT_143337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_143337
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PUNSTDRAFT_143337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
18881055
NCBI-ProteinID:
XP_007383226
JGI:
143337
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MTALGPSTSPQWDSRNRGFISPSQLQQMKRASLAQSQSPPPPQSQTTDPVASTSAPNLGQ
QQQQQQPQKPALLHRHSQSHSRATSFFSFRSRTSLDGQREQPTNTSGANAPQPPPPNPRL
SLAGPSEPPAGPMQPSRQPTVGPGPTVPGQPPPPPLHAEIRSVVQLTVAHAHKVYFSGPL
VRRIERQPDGQKPAKDEGWQEVWAQLGGTTLSIWDMKKIEEASREGREVPPTYVNVTDAF
VQVLGAVTLPSVNGAPGQRYQNVITLNTAGSNLLLFSCPSPAALVSWAAALRLTAWEKSR
LEEIYTAHLIRITLNDGRKAPSPLVGGRMEGWVRIRLAGQTDWKRLWMVLTAGTGGSGEK
EGMERPASPSQSRKRRVSNIFSRDHDASKAPQAAPLLALYASQKPKDRKRPLLTMRAVSQ
AFAVYPERPELISRSTLMKLEGLFGDEDTAAAMRGREGWILVMPELEGGNTQASEMLKWM
IGIHDAFELYGRPKGYTWDPRDPVSMMFAYPVGPDKDLLFLDREVAEALDPRDDRTSSIR
TNLRNLMAARMTSPTAPDPRASGRPNSPPRLPPPTTTSPSGAPTLPPIGDMGSAAPPPPA
ERQNSSGMLPPLSFQAERAASPPRFTTSPQMMASSPPPQQPPQQPVQPLSPTSPHSRGAL
TPITERSLSQSWSGDQHGAPGSGDQGPSRGASGQGRSSTTPATVLEEKEEPETTSFTKSP
SPVAQDYFGNARPSADQLSTRPSTDSVANRPSLDSLPSRLVSPSSPHGANGAYASSFFDR
PRSPASVLTSPYSNMGHSGLGGSPQSRMTAPGGASGTGVESTVSLVTQTHGDDASRHSLH
ATLPLSPRSQHSQLSAQNQSAGQTQPPQQQQPRTPSPDEPPPRDLFQEAGALYYMRQMDE
AEGQAPAGTTAPRFGAAPPPSQFEEDEDEDEEDDRYRDDSPTRPPAQIPPRLAGSTSPGA
GDSQPPRRGTPMGFERLLNQSPAAASDTSGGSAGGHRTSLAHRPSGARAPPTSTRRLLQK
EATGASVQPPQPPRAPSMSTMTPSASANTTESESVPTSQSGSGMAHKPSFEAPDDAADVL
AALNFLEQEQHEQQPAEASSPPPPGRASASPPPPQPKIVTPVIRAQSPESPDRNGQYRSS
FAPSKTAAERKARAQAQQAAHEAAVHKPGRVNGKRAMAQPKKGGWAESSEEEEEEDEDED
DEEVDSDAEPQARRAPASVSEHQPSTHPSIAHGQSGYSPAGSSADLHAPRAPRHLPQVPG
SRVPMNGSEEHMPMPPRSRMPSDQMTMETGRRTHYEEPPRMQAQQQHLRPHSEYPNPGAT
RQSIWTQVLEPGKPAQPTDNGRDTFVQIEAPEQTMTKAFTPHGLLSAGLQDKQDRSAKRQ
EELARETGASLVNVEGKPPPPQAGLLGAITAHERERKREGGFGAALTEREREKRAAEERQ
RKLDEFQRQQLEQMQQGGSMYGAPGGMGMNPMMGNPMMMGMNPMMSGFMGYPGMMPGFNP
QHMFAAQQAAQAYQQAMMAFSMSGSQMGGGDAGSGGPPGQIAPMNPMMTGMSGMGAFDPR
MSMMGMPPMMGGAMSPMPMGMSMQMTGGSTFQMPFQQGQFGDTLTPQGNFGGPGPSRFSP
QGSLNASPAQRPQDPADEPPPIRGQQVPPS
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcttggtccaagcacaagcccacagtgggacagccgcaaccggggcttcatc
tcaccgtctcagctccaacagatgaagcgcgcgagccttgctcagtcacagtccccacca
ccgcctcagagtcagacaaccgacccggtagcctcgacctccgccccgaatctcggccaa
cagcaacaacagcaacaaccacagaaaccggcattactgcatcgtcattcccagtcgcat
tcgcgcgccacgtctttcttttcgttccggagccggacgagcctcgacggtcaacgggag
cagcctactaacacctccggcgcgaacgcgccccagcctcccccacccaatccccgtctc
agccttgcaggcccctccgagcccccagcaggtcccatgcagccttctcgccaacccacc
gtcgggcccggccctaccgtgcctggacagcctcccccaccaccgctccacgccgagata
cgatcggttgtgcagctcacggtcgcgcacgctcacaaagtctacttctctggacctctc
gtccgaaggatcgagcgccagccggatggccagaagcccgcgaaggatgaggggtggcag
gaggtttgggcgcagcttggggggacaacgctcagcatctgggatatgaagaagatcgaa
gaggcgagtcgcgaggggcgcgaggtcccgccgacgtacgtgaatgtgaccgatgccttt
gtccaggttctcggcgccgtcaccctcccgtccgtgaacggtgcgcccggccagcgctac
cagaacgtgatcacgctcaacaccgccggatccaacctcctcctcttctcctgcccctcc
ccggctgcgctcgtctcctgggccgccgcgctccgtcttaccgcgtgggaaaaatcgcgt
ttggaggagatctacaccgcgcacctgattcgcatcacgctgaacgacggtcggaaggcc
cccagcccgctcgtaggtggtaggatggagggatgggtccgtatccggctcgcgggccag
acggactggaagcgcctctggatggtgttgaccgcgggcacgggcgggtcgggggagaag
gagggaatggagcgcccggcgagtccgagccagagccgaaagcgacgcgtgtcgaacata
ttttcgcgcgaccacgacgcgtcgaaggcgccccaggcggcaccgctgcttgcgctgtat
gcgtcgcagaagccgaaggaccgcaagcgcccgctgctcacgatgcgcgccgtgagccag
gcgttcgcggtttatccagagcggccagagttgatcagccggagtacgctgatgaaactt
gagggcctgttcggtgatgaagatacggcagcggcgatgcgcgggcgcgagggatggata
ctcgtcatgcccgagctggagggtgggaacacgcaagcgagcgagatgctcaagtggatg
attggcatacacgacgcgtttgaactttatgggcggccgaaggggtacacctgggaccct
cgggatcccgttagcatgatgttcgcgtaccctgtcggacccgataaagatctcctcttc
ctcgatcgcgaagttgcagaggcgctcgatccacgggacgaccgcacctccagcattcgc
accaacctgcggaatttgatggccgcacgtatgacgagccccaccgccccggacccgcga
gcatccggacgcccgaattctccgcctcgcctccccccaccaacgactacctcgccctct
ggcgcgccgacgttgccaccgatcggtgatatgggttccgctgcaccaccgccgccagcg
gagaggcagaactcgtcggggatgctgccgccactatcatttcaggctgaacgagcggcg
tcgcccccgcgctttacgacttcgccgcaaatgatggccagttctccgcctccccagcag
ccgcctcagcaaccggtgcaaccgctatcgcctacgtcaccccacagcagaggggccctg
acgccgatcacggagagaagcctcagtcaatcgtggtcgggcgatcagcatggcgcaccg
ggttccggagatcaaggcccatcacgcggagcgtccgggcaagggagaagctctactacg
ccggcaaccgtcctcgaagaaaaggaagaacctgagacaacgtctttcacgaagagcccg
agccctgtcgcgcaggattacttcggcaacgctcggccgtctgcggaccaactcagcacc
cggccgtcgacggacagcgtcgccaataggccctcgcttgacagcttgccatctcgcttg
gtatctccgagctcccctcacggggcgaacggcgcatatgcgtcgtcgttcttcgatcgc
ccgcgctcgcccgcgtccgtgctcacgtcgccgtactcaaacatgggccactcgggcctt
ggcggctcaccgcagtcgcgcatgaccgctccaggcggcgcttcgggcacgggcgtggag
tcgacagtgagcctggtgacgcagacgcacggcgacgacgcgagtcggcactcgcttcac
gcgacgctgccgttgtctccgcgttcgcaacattcgcaactctcggctcagaatcaaagc
gcgggacagacacagcctccacagcagcagcagccccgcacgcctagtccagacgagccg
ccgccaagggacctgttccaagaggcgggcgcactgtattacatgcggcaaatggacgag
gctgaaggccaggcgcctgcaggcacgactgcgccccgcttcggcgctgcgcctcctccg
tctcagttcgaggaagacgaagacgaggatgaggaggacgaccggtacagagacgactcg
cccactcgcccaccggcgcaaatcccgccccgtctcgcgggcagcacgtcgcccggcgcc
ggcgactcgcagcccccgcgccgcggcacgccgatgggcttcgagcggctgctgaaccaa
tcgccggccgcggcttccgacacgtccggcggctcggccggcggacaccggacttcgctt
gcgcaccggccttctggcgcacgtgcgcctcccacgtcgacgcgtcggctgttgcaaaaa
gaggcgacaggcgcgtcagtgcagccaccacaacctccccgagcgccctccatgtcgacg
atgacgccgtccgcgtctgcgaacacgaccgagtctgagtcggtaccgacgagccagtct
ggatcgggcatggcgcataagcccagcttcgaggcaccggatgacgctgcggacgtgctg
gccgcactcaacttcctggagcaggagcaacacgaacaacaaccagcagaagcatcgtcg
ccgccgccgccgggacgggcctctgcgtctccgccaccgccgcagccaaagatcgtcaca
ccagtgatacgtgcgcagtcgccagagtcgccagacaggaacgggcagtaccggtcgtcg
ttcgcgccgtcgaagaccgccgcggaacggaaggcacgtgcgcaggcacagcaggccgcg
cacgaggcggcggtgcacaagccgggtagggtgaacgggaaacgggcgatggcgcagccg
aagaagggcggatgggcagagagcagcgaggaggaggaggaggaggacgaggatgaagat
gacgaggaagtggactcggacgccgagccgcaggcacgcagggcgcccgcgtcggtcagc
gagcatcagcccagtacgcatccgtcgattgcgcatgggcagagcgggtactcgcctgcc
ggatcgtccgccgatctgcacgcaccacgtgcgccgcgtcacctccctcaagtgcctggt
agtcgcgtacctatgaacggctctgaagaacatatgccaatgcctcctcgctctcgcatg
ccctccgaccagatgacgatggagaccggtcgccgcacacattacgaagaaccccccagg
atgcaagcccagcagcagcacctccgtccccactcggagtatcctaacccgggtgccact
cgtcaatccatatggacccaggtgctcgagcccggaaagccggctcagccgacggacaac
ggaagggacactttcgtgcagatcgaggctccggaacagaccatgacgaaagccttcacc
ccccacggcctcctctccgccggtttgcaggacaagcaggatcgctcggcgaagcgccag
gaagagctcgcccgcgagaccggggcgtcgctcgtcaatgtcgagggcaagccgccgccg
ccgcaggcaggcttgctcggcgccatcaccgcgcacgagcgggagcgcaagcgcgagggt
ggctttggggccgcgctgacggaacgcgagcgcgagaaacgtgcggcggaggaacggcaa
cgcaagctcgacgaatttcaacgacagcagctggagcagatgcagcagggagggtcgatg
tacggcgcccccggcgggatgggcatgaacccgatgatgggcaacccgatgatgatgggc
atgaacccgatgatgtccggcttcatgggctaccccgggatgatgcctggctttaaccct
cagcacatgtttgccgcacagcaggcggcgcaggcgtaccagcaggcgatgatggcgttc
tccatgtcgggctcgcagatgggcggtggcgacgccggtagtggtggaccgcccggccag
attgcgccgatgaacccgatgatgacgggcatgtcgggcatgggcgcgttcgacccccgt
atgtcgatgatgggtatgccgccgatgatgggcggcgcgatgtcgccgatgccgatgggc
atgagcatgcagatgacgggcggctcgacgttccagatgccgttccagcaggggcagttc
ggtgacactctgacccctcaaggcaacttcggtgggccgggcccaagtcgtttctcgccc
caaggtagcttgaatgcatccccagcccaacggccgcaggatccggccgacgaaccgcct
ccgatcagaggccagcaggtaccgccatcctga
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