Punctularia strigosozonata: PUNSTDRAFT_58873
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Entry
PUNSTDRAFT_58873 CDS
T03131
Name
(RefSeq) VHS-domain-containing protein
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
psq
Punctularia strigosozonata
Pathway
psq03250
Viral life cycle - HIV-1
psq04144
Endocytosis
psq04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PUNSTDRAFT_58873
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PUNSTDRAFT_58873
04145 Phagosome
PUNSTDRAFT_58873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psq04131
]
PUNSTDRAFT_58873
Membrane trafficking [BR:
psq04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
PUNSTDRAFT_58873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
UIM
Vps27_GAT-like
FYVE_2
C1_1
ENTH
DZR_2
Motif
Other DBs
NCBI-GeneID:
18884289
NCBI-ProteinID:
XP_007378201
JGI:
58873
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
TMTSWLWGTSQVDELVDKATSELLPAGSEDIALNLEICDQIRSKTVPAKDAVKSLKRRLN
HKNPNVQLLALGLTDVCIKNGGDHFLQEIAARDFMDNLVSILRMPALNYEVKNKLLRLIQ
NWAIAFEGKPSLAYVPQVYKTLKAEGFNFPPKDPTVLSAAMVDTQTAPEWIDSDLCLRCR
DPFSFTNRKHHCRNCGQVFDQKCSSRSLPLPHFGISDPVRVCDNCHPKLLKHASQHKPST
HHGRSYSQGANRHRHQRDFEDAELQRAIQLSLSEMGSSHANRPGYVPEQPTDWYLSEPPL
VDRKTRPIADDEDDPDLKTAIEASLREANAPRPSAPVALETPRSDSTQPYFAYAGPGYSQ
SYPPASVPTPQPSVPSLPNYDLAPLESDVILTFNQAVEHVQAQHGQDILRYPAINELHHK
ATTLTPKLTMSIEDTNRKHGT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
accatgacatcctggctgtggggaacgtctcaagtagacgagctagtcgacaaagcaacg
tcggagcttctccccgctggctcagaggacattgcactcaatctcgagatctgcgaccag
attcgctcgaagacggtgccagccaaagacgctgtgaagtcactcaagcggagactgaat
cacaagaaccccaatgttcagctactagcgctcggtttgaccgacgtctgtatcaagaat
gggggggatcatttcctgcaggagattgctgctcgagacttcatggacaacttggtatcc
atcctgaggatgccagccctcaactatgaggtcaagaacaagttgctgcgcttgattcag
aattgggcgattgctttcgaaggcaaacctagccttgcctatgtaccccaggtgtataaa
acattgaaggctgaaggcttcaattttcccccgaaggatccaaccgttctaagcgcagcc
atggttgacacccagaccgcgccggaatggattgattctgatctctgccttcgttgtcgt
gatcctttcagctttaccaatcgcaaacatcattgccggaactgtggacaagtcttcgat
caaaaatgctcctccaggtctctccctcttccacacttcggcatctctgatcctgtacga
gtgtgcgacaattgccatccaaagctcctgaagcacgcgtcccaacacaagccttcgact
catcatggccggtcatatagccaaggagccaaccgacaccgtcatcagcgggacttcgaa
gatgctgagcttcagagggccatccagctttctctttccgagatgggatcgtctcatgca
aaccgtcctggctatgttccggagcagcccaccgactggtatttgtcggagccgcccttg
gttgaccggaagacgcggcctattgcggatgacgaagacgatcccgacttgaaaaccgct
atcgaggcgagcctaagggaggcaaatgcaccgcgtcccagcgcacccgtcgcactggaa
accccgcgttcggactcaacgcagccttatttcgcgtacgccggccctggatactctcag
tcgtatcctcctgcatccgtgcctacccctcagccatccgtgccatcgttaccgaactac
gatcttgcgcctttggagtccgacgtcatcttgacgttcaaccaagcggtcgaacatgta
caggctcaacatggtcaggacatactgcgctatccggctatcaatgagcttcaccacaag
gcgacgaccttaacgccgaaactcactatgagcatcgaggacactaaccgcaaacatggt
acgtga
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