Punctularia strigosozonata: PUNSTDRAFT_84375
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Entry
PUNSTDRAFT_84375 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
psq
Punctularia strigosozonata
Pathway
psq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUNSTDRAFT_84375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_84375
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PUNSTDRAFT_84375
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PUNSTDRAFT_84375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
Swi5
Motif
Other DBs
NCBI-GeneID:
18886135
NCBI-ProteinID:
XP_007381889
JGI:
84375
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAARKLQTEIDRTLKKVQEGVELFESIYDKMQASTNMTQKEKLEADLKTQIKKLQRLRDQ
IKTWVASNDIKDKSALVDNRKLIETQMEKFKACEKEMKTKAFSKEGLIQSAKLDPKAQEK
SEQEEWVQNQIEQLQNQVEQAEAEIEALQAGGKKKKASSSNARAEELERLNERRKWHISR
LEIIMRLLDNGSVAPDQVKALHEDVTYFVENNAEEEFEEYEGMYDDLNLDEKEELFGLAA
EHDDDDDSESDDASEPADLPPRTPLKKQTHDDDRETNGKREGSPATKKAPVTLQLRRTSA
AAESKPPPNPNFSQVPMASILKNGLNPTPTPPPPRPAAQMPLRYASAAAAAVAPTPAKDA
HPTQPSNATSSTSTVTPSHPTPPTPTAPSISSSSVPTTIADASSSPSLTHPSVTSPMLST
ASVSGKGADGSMASEMSGSPALSDAAATSSPQRPKGAPTPPPLEYQQASRVSTLSQQTVT
PENYPVTRRSNGTPGAQQQQQPQAGSSAPSPLPAQLQQASPSSAPQYPPGVRGPEAASSS
ADPMHIPQQQQTRQASIGTPAPRTAPSERPGSATQQYLSTFSDLAASYESVKAKSNAKMG
NTEQVHKFLESGYQTAPQPSDTERPRYYVPKNPWPTPAYYPQVPNPILSQPGIISQLDVE
TLFYVFYYHPGTYQQYLAAKELKRQSWRFHVKYLTWFQRHSEPQAITDEYEQGVYVYFDW
EGSWCQRKKSDFRFEYRYLSED
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacggaaactacaaacggaaatcgaccggaccttgaaaaaggttcaggagggc
gtcgagctcttcgagagcatatacgacaagatgcaggcgtcgacgaacatgacgcagaag
gagaagctcgaggcggacttgaagacgcagatcaagaagctgcagcggttgcgggaccag
atcaagacctgggtcgcgagcaacgacatcaaggacaagtcggcgctcgtggacaaccga
aagctcatcgagacgcaaatggagaagttcaaagcgtgcgagaaggagatgaagacgaaa
gcgttctcgaaagaaggtctcatccaatccgccaagctcgacccgaaagcgcaggaaaag
tcggaacaggaggagtgggtgcagaaccagatcgagcagctgcagaatcaggtggagcag
gcggaggcggagatcgaggcgctgcaggccggggggaagaagaagaaggcgagcagctcg
aacgcgcgcgcggaggagctcgagcgcctgaacgagcggcggaaatggcacatctcccgg
ctggagatcatcatgcgcctgctcgacaacggctcggtcgcgcccgaccaggtcaaggcg
ctgcacgaggacgtgacctactttgtggagaacaacgcggaggaggaattcgaggagtac
gagggcatgtacgacgacctcaacctcgacgagaaggaggagctgttcggcttggcggcc
gagcacgacgacgacgacgactcggaatcggacgacgcgagcgaacctgcggatctacca
ccacggacaccgttaaagaagcagacacatgatgacgatcgagaaacaaacgggaaacgg
gaaggcagcccagcgacgaagaaagctccggtcacattacaactaagaagaacgtcagca
gccgcagagtcgaaaccgcctccgaatccaaatttctcgcaggtaccgatggcgagtata
ctaaagaatggtctgaacccgacgccgacgccaccgccaccacgacccgccgcacaaatg
cctttacgatatgcatcggcagcggcggcagcggtagcaccgacaccggcgaaggacgcg
cacccaacgcaaccgtcgaatgcgacgtcgtccacctcgaccgtgacgccgtcacatcca
acgccgccgacgccaactgcaccgtcaatatcgtcgtcttccgtaccgacgacaatagcg
gacgcgtcgtcttcaccgagcttgacacatccgtcggtcacgagccccatgctctcaacg
gcttcggtatcaggcaagggcgcggacggttctatggcatcggaaatgtcaggttcgccg
gcattatcggacgcggcagcaacatcgtcaccacagcggcctaaaggcgcaccgacacca
cctccactggagtatcagcaggcctcgcgcgtgtcgacattatcccagcagaccgtcact
ccagagaactaccccgtcacgcggcgctcgaacggcacaccgggcgcgcaacaacaacaa
cagccccaggcgggctcctccgcgccgtcaccgctgccggcgcaactgcagcaagcgtcg
ccctcgtctgcgccccagtacccgccgggcgtgcggggcccggaggccgcgtcgagcagc
gcggaccctatgcacataccgcagcagcagcagactcggcaggcgagcatcggcacgccc
gcgccacggacggcgccgagcgagcgccccgggagcgcgacgcagcagtacctctcgacg
ttctccgacctcgcggcgtcgtacgagagcgtcaaggcgaagtcgaacgccaagatgggc
aacaccgaacaggtgcacaaattcctcgagagcgggtaccaaacggcgccccagccgtca
gatacggaaaggcccagatactacgtaccgaaaaatccgtggccgacacctgcgtattac
ccccaggtaccgaatccgatcctgtcgcaaccgggcatcatcagccaattggacgtcgag
acgctcttctacgtcttctactaccacccgggcacatatcaacagtacctggccgcgaaa
gagctgaagcgccaatcctggcggttccacgtcaagtacctaacgtggttccagcggcat
tcggaaccgcaggcgatcacggacgaatacgagcagggtgtctacgtgtatttcgactgg
gaaggctcgtggtgccagcggaagaagagtgatttccggttcgagtaccgatatctttcg
gaggattga
DBGET
integrated database retrieval system