Punctularia strigosozonata: PUNSTDRAFT_91144
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Entry
PUNSTDRAFT_91144 CDS
T03131
Name
(RefSeq) WD40 repeat-like protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
psq
Punctularia strigosozonata
Pathway
psq04111
Cell cycle - yeast
psq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PUNSTDRAFT_91144
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PUNSTDRAFT_91144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psq04121
]
PUNSTDRAFT_91144
Ubiquitin system [BR:
psq04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
PUNSTDRAFT_91144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
F-box-like
ANAPC4_WD40
NBCH_WD40
Nup160
F-box
Motif
Other DBs
NCBI-GeneID:
18886443
NCBI-ProteinID:
XP_007386787
JGI:
91144
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MAEAYHDPSYSKATTPGSGPSTISLSPTLYIPIVSPPTPAPSPRPKVSSLPPPASASTND
TVPGPTPTLPADSPLHAALSAYPALPPSARLAFLTALLQLLASSELLHLSAALAPRLKRD
FLRDLPPELALHVLGYVDDHRTLARAAGVSRAWRALVKDEGAWRRMCVRYGFRAEGVGEE
GEWEDEDEEHGWDGGRVPELGDGFSFRRYFRSEYTAVMNWRRGGRLLRAHRVSVSAPAAP
GSTSPNVNIGAVSSPDQGVVTAVALDGRWVVVGLANARVHVFSARTGVLSRTLVGHASGV
WAVWLVSQSGGRDEEEDEEGEERGGLGLDLYPGEFVEEGRRGGEGEREREERRDRRKRRV
RDKPSDPGQASDGWGQGGALVVSGGCDKTVKVWDVRTGYCLHTLAGHTSTIRCIKVLHGR
PVAVSGSRDCTLRVWDVDTRKGKGGGRLLRTLEGHQGSVRCLDVCGARVVSGSYDCTARI
WDVDTGECLHVLRGHYHQIYAVAFDGVRVASGGLDTTVRVWDAATGACLALLQGHTALVC
QLQLSPTTLATGGSDGRVITFAICSPPPDSPPPTSRSPHPYRHRDATSSSSSSSSSTPTP
TPTFTVQHKVAAHDSSVTALQFDDRFLVTAGNDGRVRLFETRTGNYVRELSEPCESVWKV
AYTRGRGGKGGKGGQGGAGDVLVVTCKRAGKTVMEIWSFKAGEDGR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgtaccacgacccgtcatactccaaggctactactccaggctcgggaccc
agcacgatatcgctctcaccgacgctctacatccccatcgtctccccacccaccccggca
ccatctccccgacccaaggtctcctcgctccctccacccgcctccgcctctacgaatgac
accgtccccggcccgacccccactctacccgcagactcgcccctacacgccgccctctca
gcttacccggccctcccgccctccgcccggctcgccttcctcaccgccctcctccagctc
ctcgcctcctctgagctgctccacctctccgccgcgctcgccccgcgcctcaagcgcgac
ttcctgcgcgacctcccgccggagctcgcgctgcacgtgctgggatacgtcgacgaccac
cggacgctcgcgcgcgcggcgggcgtgagcagggcgtggcgggcgctggtcaaggacgag
ggcgcgtggaggcggatgtgcgtccggtacgggtttcgagcggagggggtgggcgaggaa
ggcgaatgggaggacgaagatgaagagcatggatgggacgggggacgggtgcccgagctc
ggggacggcttctcgttcaggcgctatttccggtcggagtataccgcggttatgaactgg
cgccgggggggccgcctgctccgcgcgcaccgcgtctcggtctccgcgcccgccgcaccg
ggatcgacgtcgccgaacgtgaacatcggcgcggtgtcgagcccggatcagggcgtcgtc
accgccgtcgcgctcgacgggcgctgggtcgtcgtcgggctcgcgaacgcgcgggtgcac
gtgttcagcgcgcggacgggtgttctgagtcggacgctggtggggcatgcgagcggcgtg
tgggcggtgtggcttgtgagtcagagtgggggtagggacgaggaggaggacgaggaggga
gaggagcggggcgggttggggctggatttgtatccgggagagtttgtggaggaggggagg
aggggaggggagggcgagcgagaaagggaggagaggagggataggaggaagagacgggtg
cgagataagccgtctgatccggggcaggcgagcgatgggtggggacagggcggcgcgctg
gtcgtctcgggcgggtgcgataagacggtgaaggtgtgggacgtccggaccggatactgc
ttgcacaccctcgccggccatacgtccacgatccggtgcatcaaggtcctccacggccgg
cccgtcgcggtatcgggttcgcgtgactgcacgttgcgcgtgtgggacgtggatacgagg
aaggggaagggaggtgggaggttgttgcggacgctggaggggcatcagggaagtgtgagg
tgcttggacgtgtgcggcgcaagggtcgtgagcgggagttacgactgcacggcgcggata
tgggacgtggacacgggcgagtgtctgcacgtcctccgcgggcattatcaccagatatat
gcggtcgcgttcgacggcgtgcgcgtcgcgagcggtgggctggacacgaccgtgcgcgtg
tgggacgctgcgaccggagcgtgtttggcactgctgcagggccacacggcgctcgtgtgc
cagcttcagctgagcccgacgacgctcgccacgggcggctcggacgggcgggtgatcact
ttcgccatctgctcccctcctcccgattctcctcctcctacatctcgatctccccaccca
tatcggcaccgtgatgctacatcctcctcctcctcctcctcctcctcaaccccgactccg
actccgacgtttacggtccagcacaaggtcgcggcgcacgactcgagcgtgaccgcgctc
cagttcgacgaccggtttttggtgacggccgggaacgatgggcgggtgaggttgttcgag
acccggacggggaattatgtgagggagctgagcgagccgtgcgagagcgtgtggaaggtt
gcgtatacgaggggcaggggaggaaagggaggaaagggaggacagggaggggcgggggac
gtgttggtggtgacgtgcaagagggcggggaagacggtgatggagatttggagttttaag
gcgggagaggatgggcggtga
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