Pelodiscus sinensis (Chinese soft-shelled turtle): 102447699
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Entry
102447699 CDS
T02980
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102447699 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102447699 (MBD4)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102447699 (MBD4)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102447699 (MBD4)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102447699 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102447699
NCBI-ProteinID:
XP_006132889
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MAAPEVRGQETGRYTFSDKSDMQIGKKTKEDGKELVTDTRESFEGTETIAETLPCKEDAV
VASEEASRCLKTTPDGWEKITKQRQSGKTAGKYDVYFISPQGVKLRSKCALVAYFTKNGE
TILKPEDFDFTAPPQSQTRSRTKGSSEEPVRPRLQNKRCNSKAQDLSVQRSKEVKVLELQ
TSNEQLENISIHLQGREDLVIKDIKPKEYCRKAKEKGAVGKRDQIKKARKRSERRNPDHS
QNKRLRKASCNKQEAESSQIKKFQQKKDVCVSESGIIDNQNLNPTDTGKANTPSKDEIMT
LGSHLEMRLEPVTPLSEKKSRTMGELGYAEKNSDDAAIKSDKNIAEKEGSCVFGKEKDWI
HLGNQDFKPGTETNISISQPSAKKSFTSVKTLQVMITALHISVNFKLLPKWPDFQSRKTW
FREDCPPRTQVERRKTSPYFSSKYSKEAPSPPRRKAFRKWTPPRSPFNLVQEILFHDPWK
LLIATIFLNKTSGKMAIPVLWEFLEKYPSPEVARTADWKEMSELLKPLGLYELRAKTIIK
FSDEYLTKQWRYPIELYGIGKYGNDSYRIFCVNEWKEVHPQDHKLNTYQAWLWENHEKMS
LG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccggaagtaagggggcaagagacgggcagatatactttcagtgacaaaagt
gacatgcaaattggaaagaaaacaaaagaagatgggaaagaattagtgacagatacaaga
gaatcttttgaaggtactgaaaccatagcagaaacactcccatgcaaagaagatgcagtt
gttgcatcagaagaggcttctagatgtctgaaaaccactccagatggatgggagaagatc
acaaagcaaagacagtccggcaaaactgcaggaaaatatgatgtttatttcatcagtcct
caaggagtgaagttaagatccaaatgtgcacttgtggcttactttacaaaaaatggagag
actattcttaaacctgaagattttgactttactgctcctcctcagagccaaactcgatca
agaaccaaaggatccagtgaagaacctgtgagaccgagattacagaataaacgatgtaat
agtaaagcacaagatcttagtgtgcaaagaagcaaagaagttaaagttctggagttacag
accagtaatgaacagttggaaaacatttccatccatctacagggcagggaggacttagtc
attaaagacattaagccaaaggaatattgtagaaaggccaaagaaaagggagcagttgga
aaaagggatcaaattaagaaagctagaaagaggtcagaaaggaggaatccagatcacagc
caaaataaaaggctgagaaaagcatcatgtaataaacaagaggctgagagcagccaaata
aaaaaattccagcaaaagaaagatgtttgtgtttctgagagtggcataatagacaatcag
aacttaaaccccacagatactggaaaagcaaacacaccctcaaaggatgaaataatgact
ttgggatcacatttagagatgcgtcttgaaccagtaactcctctctctgaaaagaagtca
agaaccatgggagagttaggatatgcagagaagaattctgatgatgcagctataaaatct
gacaagaacattgcagaaaaagaaggatcatgtgtgtttgggaaagagaaagattggata
catttgggtaaccaggatttcaaacctggcactgaaacgaacattagcatttcacagcct
tctgccaagaaaagctttacatcagtgaaaacgcttcaagtaatgatcactgctctccac
atatcagttaactttaaattactgccaaagtggccagattttcaatcaagaaaaacttgg
ttcagagaagactgtcccccaagaacacaagtagagagaaggaaaactagtccatatttt
tctagtaaatacagtaaagaagctccaagcccaccaagaaggaaggccttcaggaaatgg
actcctcctcggtctccatttaatttggtccaagaaatactctttcatgatccatggaag
ctcctcattgcaaccatatttctcaataagacctcaggtaagatggcaatacctgtgctc
tgggagtttctggagaaatatccttcccctgaagtagcaagaactgcagactggaaagaa
atgtcagagttgcttaaacctcttggcctttatgaactcagagcaaagaccattatcaaa
ttttcagatgagtatctgaccaagcagtggaggtatcctattgagctgtatgggattgga
aagtatggcaatgattcatacagaatcttctgtgtgaatgaatggaaggaggtacatcca
caagatcacaaactcaatacataccaagcatggctctgggaaaaccatgaaaaaatgagt
cttggttga
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