Pelodiscus sinensis (Chinese soft-shelled turtle): 102450132
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Entry
102450132 CDS
T02980
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102450132 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102450132 (ARID1B)
03021 Transcription machinery [BR:
pss03021
]
102450132 (ARID1B)
03036 Chromosome and associated proteins [BR:
pss03036
]
102450132 (ARID1B)
Transcription factors [BR:
pss03000
]
Eukaryotic type
Helix-turn-helix
ARID
102450132 (ARID1B)
Transcription machinery [BR:
pss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102450132 (ARID1B)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102450132 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102450132
NCBI-ProteinID:
XP_014425012
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MMRSYGSSYPDYSNPSAPPQQQPQAQAAGAVPGSQQAAAGMGMGKDMGSQYGAASPAWAA
AQQRAHPAMSPGSTGQTISRTQGSPMDPMVMKRPQLYGMSNNPHSQTQQSSPYPGQSYGP
PGPQRYPMGMQGRTSGALGGMQYPQQQMPPQYGQQGISGYCQQGQQPYYNQQPQPQHLPP
QAQYLSQAQQRYQTQQDMSQEGYGTRSQPPIASGKPNHEDLNLIQQERPSSLPDLSGSID
DLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGS
NQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQISQYG
PQQTGPSMSPHPSPGGQIHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTS
YSGPGPGMGINANSQMHGQGPSQPCGTLPLGRMPSAGMQSRPFPGNMGSMTPNSPGMSLQ
GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNXXXXXXQPMNNSAGLMNP
QAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGPPQPESKSKKSSSSTT
TGEKITKVYELGSEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGG
LAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDT
KKQHKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNS
AVSVHDPFSDISDSAFPKRNSMTPNAPYQQGMNMSDMMGRMPYEPNKDPFGGIRKVPGSS
EPFMTPGQMPNSGIQDIYNQTPSGAMSTMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPP
SGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQDMYNQYSNTYS
GPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGPMQSSSTSEGPQQNIWPTRNDMP
YPYQNRQGPGGPAQAPPYPGMNRTDDLMVPDQRINHESQWPSHVNQRQPSYMASSASMQP
ITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQ
VTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKAL
DHKAVKKDDSQSLAVDTGKEEENYECIDYFDEEEEEDEEDEEEDENEKTEGEEKSTVFAT
PSAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTT
EHIQTHFESKMEIPPRRRAPPPLNSPNKKKDLGGKGESEEQQEKSITATIDDVLSARPGA
LPEDSNPGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCIC
VSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVAC
SKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPF
PTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVC
REMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPL
EPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSMVASVICDVLFQIG
QL
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggagctatggcagcagctaccctgattacagcaaccccagtgccccaccacag
cagcagccgcaagcccaggcagcaggggcagtcccgggaagccagcaggcagcagcgggc
atgggcatgggcaaagacatgggctcccagtatggagctgcaagcccagcctgggcagca
gcacaacaaagagctcacccagctatgagccctggaagcactggtcagaccatcagcaga
acccagggcagcccaatggatccaatggtaatgaagagacctcagttgtatggaatgagc
aataaccctcattcacagacacagcaaagcagtccatatccgggacagtcatatggccct
ccaggacctcaacgatatccaatgggaatgcaaggacggacgtcgggagccctgggagga
atgcagtatccacaacaacagatgccgcctcagtatggtcagcaaggcataagtggctat
tgccaacaaggccaacagccatattacaaccagcagccacaacctcagcatttgccaccc
caggcccagtatctgtcacaggcccaacagaggtaccagactcagcaggacatgtctcag
gaaggctatggaacaagatcccaaccccctatagcctcaggaaagcctaatcatgaagac
ttaaacctaatacaacaagaaaggccatcaagcttaccagatttatccggttccattgat
gacctgcccactggaactgaagcaacactgagttcagcagttagtgcctcaggttctaca
agcagccagggagagcagagtaaccctgcacagtcacctttctcccctcatgcttcccca
catctctctggcatcccaggaggtccatcgccttcccctgtaggctcacctgttggaagc
aaccaatcaagatcaggtccaatttctcctgcaagtattccaggtagtcagatgccacct
cagcctcctggtagccaatcagagtccagctctcatcctgccttgagccagtcaccaatg
ccacaagatcgaggttttatggcaggcatacagaggaacccacaaatatcccaatatgga
cctcaacaaactgggccttccatgtcaccacatccttcccctggaggacaaatacatcct
gggattggtagtttccagcagagtaattcaagtggtacttatgggcctcagatgagccaa
tatggaccacaagggaactactccagaccgccaacgtacagtggggtgcctaacacaagt
tacagtggcccaggacccggcatgggtataaatgccaatagtcagatgcatggacagggg
ccaagccagccgtgtggtaccctgcccctgggacggatgccatcagctgggatgcagagc
agaccatttcctggaaacatgggcagtatgacccccaattctcctggcatgtcgctgcag
ggtggccctgggatgggcccacctatgccaactgtgaaccgtaaggcacaggaggcagct
gctgcagtgatgcaggctgctgcaaactccgctcagagcaggcaaggcagttttcctggc
atgaatnncnnnnnnnnnnnnnngcagccgatgaacaacagcgctggcctgatgaaccca
caagcacctccttacagcatggcacctaacatggtgaacagttcaacagcacctatgggt
cttgcagatatgatgacacctggtgagtccaaactgccccttcctctcaaagcagatggc
aaagaagaaggacccccacagcctgagagcaagtcaaagaaatcaagttcatccaccaca
actggagaaaagatcacaaaagtctatgagctgggaagtgagccagaacgcaaaatgtgg
gtggaccggtacctcactttcatggaagaaaggggcacacctgtggccagtctgccagca
gtaggcaagaagccactggacctgttcaggctatatgtctgtgtcaaagagattggaggt
ttagcacaggttaataaaaacaagaagtggcgcgagttggcaaccaacctgaatgttggc
acttcgagcagcgcagccagctccctgaaaaaacagtatattcagtacctgtttgccttt
gagtgtaagattgaacgaggggaggagccccctccagaggtcttcagcactggagatact
aagaaacaacataagattcagccgccatctcctgctaattctggttccctacaaggtccc
caaactccccagtctactggtagtaattccatgacagaagtgccaggcgacttgaagcct
ccaacaccagcatcaacacctcatggacagatgacgcccatgcagggcggcagaaacagt
gcagttagtgtgcacgatcccttttctgatataagtgattcagcattcccgaagcgaaac
tccatgacgccaaatgcaccataccagcaggggatgaacatgtcagacatgatgggaagg
atgccctatgaaccgaataaggatccttttggtggtataagaaaagtgcctggaagcagt
gagcccttcatgacccctggacaaatgcccaatagtggaatacaggatatttataaccaa
actccatctggagcaatgtccaccatgagcatgagccagcggcaacagttctcttacgga
agtggctatgacaggaggcatgaaccatatgggcagcagtatccagggcaaggacctcct
tcaggacaaccaccgtatggaggacatcaacctgggatgtatccacagcagcagaactat
aagcgtcatatggatggcatgtatgggcctccagcaaaacgccatgaaggggatatgtat
aacatgcagtatggcaatcagcagcaagatatgtataaccagtacagcaacacttattct
gggccagacaggaggcctatgcagggacagtatccttatccttacaacagggagaggatg
cagggccctggacaaatgcagcagcatggaatacccccgcagatgattggccccatgcag
tcatcgtccaccagtgaaggtcctcagcaaaacatttggccaacacgaaatgatatgcct
tacccttaccagaacaggcaaggtcctggaggccctgcacaggccccaccctatccaggg
atgaaccgcactgatgatctgatggtacctgaccagaggataaaccacgagagtcagtgg
ccttctcatgtcaatcaacgacagccttcttatatggcatcctcagcctccatgcagcct
attactcgacctcctcagtcgtcctaccagacacctccctcaatgccaaaccacatctct
agggctccaagtccagcatccttccagcgttctttagagaatcgtatgtctccaagcaag
tctcctttcctaccctctatgaaaatgcagaaggttatacccacagttccagtgtcacaa
gtcacaggacctccaccccagcccccaccaattaggcgagaaatcactttccctccaggc
tctgtagaagcatcacaaccagtcttaaaaccaagacgaaagattacctcaaaagatatt
gtaactcctgaggcctggcgggtgatgatgtctcttaaatctggccttttggctgaaagt
acctgggccctggacactattaatattcttctgtatgatgacagtactgttgctactttc
aacctttcacagttatctggatttcttgagcttttggtagaatattttagaaaatgccta
attgacatttttggaatccttatggaatatgaagtaggagatccaggtcacaaagcactt
gatcacaaagcagtcaagaaggacgacagccagtccttggcagtggatactggaaaagag
gaggaaaactatgaatgtattgactactttgatgaagaggaggaagaggacgaggaggac
gaggaggaagatgaaaatgaaaaaacagaaggagaggaaaagagcactgtttttgccact
cccagtgccattgctgatccaagtgagaggccaaaacaagccagtaaatttgacaagctg
ccaataaagattgtaaagaaaaataatctatttgttgttgatagatctgacaaactaggg
cgtgttcaggaattcaatagtgggcttctccactggcagcttggtgggggtgatacaact
gaacacatccagactcactttgaaagcaagatggagattcctccacggaggagggcccct
ccacccttgaactctccaaacaaaaagaaggatctgggggggaaaggtgaatctgaagaa
caacaggaaaaaagtataacagctaccatcgatgatgtcctgtcagctcgacccggagca
ttgcctgaagactcaaaccctggctcccagacagagagcagcaaatttccctttgggatc
catcaggccaaaagccaccggaacattaaattgctagaagatgaaccaaggagccgggac
gagactcctctatgcaccataactcattggcaagattccttggctaaacgctgcatctgt
gtgtcaaatattgtccgtagcttgtctttcgtgcctggcaatgacgccgaaatgtccaaa
catccaggcttggtgctgatcctgggaaagttgatcctccttcaccacgagcatccggaa
agaaagcgagctccacagacatatgagaaagaggaagaggaggacaaaggggtggcctgc
agcaaggatgagtggtggtgggactgcctcgaagtcttgagggataatacattggtcaca
ttagccaacatttctgggcagctagacttgtctgcttacacagaaagcatctgtttgcca
attttggatggcttgctgcactggatggtgtgcccatctgcagaggcgcaggatcctttt
ccaactgtggggcccaactcagtcctatcgcctcaaagacttgtgctggagaccctctgt
aagctcagtatccaggacaataatgtggaccttatcttggccactcccccattcagtcgt
caggagaaactctacgctactttagttaggtacgttggggaccgcaaaaacccagtctgc
cgagaaatgtccatggcgctcttatcgaaccttgcccagggggacacgttagcagcaagg
gcaatagctgtgcagaagggaagcattggaaacttgataagtttcttggaggatggggtc
actatggcccagtaccaacaaagccagcataacctcatgcacatgcagcctccacctctg
gagccacctagcgtagacatgatgtgcagggcagccaaggccttgctggccatggctaga
gtggacgagaaccgctcagaattccttttgcatgagggtcgtttgctggatatctcaata
tctgctgtcctgaactctatggttgcatctgtcatctgtgatgtactttttcagattggg
cagttatga
DBGET
integrated database retrieval system
