Pelodiscus sinensis (Chinese soft-shelled turtle): 102456647
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Entry
102456647 CDS
T02980
Symbol
VCL
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin
KO
K05700
vinculin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04520
Adherens junction
pss04810
Regulation of actin cytoskeleton
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102456647 (VCL)
04520 Adherens junction
102456647 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102456647 (VCL)
04810 Regulation of actin cytoskeleton
102456647 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pss04812
]
102456647 (VCL)
04147 Exosome [BR:
pss04147
]
102456647 (VCL)
Cytoskeleton proteins [BR:
pss04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102456647 (VCL)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102456647 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
102456647
NCBI-ProteinID:
XP_025042057
Ensembl:
ENSPSIG00000005706
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MTLGFFMQVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYL
IDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGM
TKMAKXYQEDRVMLVNSMNTVKELLPVLISAMKIFVTTKSSKSQGIEEALKNRNFTVEKM
SAEINEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPSAPPGDAGE
QAIRQILDEAGKVGELCAGKERREVLGTCKMLGQMTDQVADLRARGQGATPMAMQKAQQV
SQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGIEGEEHIRGIMAEAR
KIAELCEDPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARVLAKQVATSLQNLQSK
TNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGP
YRQDLLAKCDRVEQLAAQLADLAARGEGESPQARAVATQLQDSLKDLKTRMQETMTQEVS
DVFSDTTTPIKLLAVAATAPPDAPNRDEMFDERAANFENHAARLGATAEKAAAVGTANKT
TVEGIQATVKSARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEA
IDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSED
PKFREAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQ
PQEPDFPPPPPDIEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQ
PMMMAARQLHDEARKWSSKPGVTVANEAGEADVDVAEQQDADDVEFTLPSDPEDDYEPEL
LLMPTSQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKR
ALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATM
LGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWY
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgactcttggatttttcatgcaggttggaaaagaaactgtgcagacaactgaagaccag
attttgaagagagacatgccaccagcctttatcaaagtggagaacgcctgcactaaactc
gtccaagcagcccagatgttgcaagcagatccttattcagttcctgctcgtgattatctc
attgatggctctagaggcatcctttctggaacatcagacttgcttctgacatttgatgag
gctgaggtccgtaaaatcatccgtgtctgcaaaggaattttggaatacctcactgtggca
gaggtggtagagactatggaggatttggtgacatacacaaagaatctggggccaggaatg
acaaagatggccaaannatatcaggaagacagagtgatgctggtaaactccatgaacaca
gtgaaggagctgttgccagtccttatttcagctatgaagatttttgtaactacgaaaagt
tccaaaagccaagggatagaagaggccttgaaaaaccgcaatttcacagtagagaagatg
agtgctgaaataaatgagatcatccgtgtgttacagctcacttcctgggatgaggatgcc
tgggctagcaagaaggacactgaagctatgaagagagctttggccttaatagattccaag
atgaaccaggcaaagggctggctaagggaccccagtgcacccccaggggatgctggtgag
caagctataaggcagatccttgatgaagctggaaaagtgggagaactgtgtgcaggcaaa
gaacgcagagaggttctgggaacctgtaaaatgctaggccagatgactgatcaagtggct
gatctccgagctagaggacaaggtgctacaccaatggccatgcagaaagcacagcaggtg
tctcaaggtctggatttgcttacagcaaaagtggaaaatgcagcccgcaaattggaggcc
atgaccaactctaagcaggcaattgccaaaaaaattgatgctgctcagaactggctcgca
gaccctaatgggggaattgaaggggaagaacatattcgggggattatggctgaagccagg
aagattgcagaactctgtgaggaccccaaagaaagagatgacattctgcgttccttggga
gaaatctctgctctgactgctaaactgtcagatctacggagacatggaaaaggagactct
ccagaggcccgagtactggctaagcaagtagcgacatcgctgcagaatttgcagtctaaa
acaaacagggcagtagcaaacaccaggccagttaaggcagctgttcatttggagggcaag
attgagcaagcccaacggtggattgacaatcctacagttgatgaccgtggagtaggccag
gctgcaatccggggactggtggctgaaggtcggcgtttagccaatgtcatgatggggcct
tatcgtcaagacctgcttgccaagtgtgatcgtgtagaacagctggctgcccagctagct
gatctggcagcaagaggagagggagagtctcctcaggctcgggcggttgccacccagctc
caggattctttgaaggatctgaaaacaaggatgcaagaaactatgacccaggaggtttct
gatgtttttagtgacactacaaccccaattaaactattggcagtggcagccactgcacct
cctgatgcacccaacagagatgagatgttcgatgaaagggcagcaaactttgaaaaccat
gctgctagacttggagcaacagcagaaaaagcagctgctgttggaactgctaataaaacc
accgtggaaggcattcaagccactgtgaaatcggcaagagaactcacgcctcaggtaata
tcagctgctcggatccttttgagaaaccctggaaatcaagctgcttatgaacattttgag
accatgaaaaaccaatggattgataatgtggaaaaaatgacagggttggtagatgaagca
attgataccaagtctttgttggatgcatcggaagaagctattaagaaagacctagataaa
tgtaaagttgcaatggccaacatccaacctcaaatgcttgtcgctggtgctaccagcatt
gctcgacgagcaaaccggatcctgttagtggccaaaaaggaagttgaaaattcagaggat
cccaaattccgcgaagctgttaaagcagcctctgatgacctaagcaaaactatatcacca
atggtaatggatgctaaagctgtggcaggaaacatttctgatcctggtttgcagaagagc
ttcctggattctggatataggattctgggagctgtggcaaaagtcagagaagccttccag
cctcaagaacctgattttcctcctcctccccctgatattgagcagcttcatctgactgat
gaacttgctcctccaaaacccccccttccagagggtgaagttccaccacccagaccaccg
cctccagaagagaaggatgaagagttcccagagcagaaagcaggagaagtgatcaatcag
cccatgatgatggctgctaggcagctacacgatgaagccaggaaatggtctagcaagcct
ggtgtgactgtggctaatgaagccggtgaggctgatgtagacgtagctgagcagcaggat
gcagatgatgttgaattcactcttccctctgaccctgaagatgattacgagcctgagctg
ctgttaatgccaaccagtcagcctgttaaccagcctattctggccgctgctcagtctctg
catcgggaagcaaccaagtggtctagtaagggtaacgatatcattgctgctgcgaagcga
atggccttgctgatggcagagatgtcccgtctggtgagaggtggcagtggaaccaaacgt
gcccttattcagtgtgccaaggatattgctaaagcgtcagatgaagtgactcgattggcc
aaggaggtggcaaagcagtgtaccgataagcgtattcgaacaaacctcttgcaggtctgt
gagcgaatcccaactatcagcacgcagctcaaaatcctttccactgttaaagctaccatg
ttgggcaggacgaacatcagtgatgaggagtcagaacaggctacggagatgctggttcac
aatgctcagaacctcatgcaatcggtaaaggagacggtgagagaagcggaagcagcatct
attaagattagaacagatgctggattcactctgcgctgggttagaaagactccttggtat
cagtaa
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