Pseudomonas syringae pv. tomato DC3000: PSPTO_3023
Help
Entry
PSPTO_3023 CDS
T00118
Symbol
uvrC
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSPTO_3023 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3023 (uvrC)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSPTO_3023 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
HHH_2
HHH
UVR
GIY_YIG_2
GIY_YIG_domain
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AAO56513
UniProt:
Q880X7
LinkDB
All DBs
Position
complement(3398488..3400311)
Genome browser
AA seq
607 aa
AA seq
DB search
MTQTFDPSAFLATCSGRPGVYRMFDADATLLYVGKAKNLKKRLASYFRKTGHAPKTGALV
ARIAQIETTITNNETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGTYPRLSIHRG
AKKAKGRYFGPYPSAGAIRESLSLLQKTFQVRQCEDSFFKNRNRPCLQYQIKRCKGPCVG
LVEPEVYAEDVRHSVMFLEGRSNALSDELNASMEKAAMALDFERAAELRDQVALLRRVQD
QQSMDGGTGDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVGEVMSAFLA
QYFLGGVDRELPSEVIVNVVNEDFPALIDAIEESRGREMTISHRVRGTRARWQQLAVTNA
EQALAARLANRQHVASRFEALAVVLNLDEPPMRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRFNIEGVTAGDDYAAMHQALTRRYSRIKAGEGKLPDVLLVDGGKGQMSMARDVLN
ELQVPDLILLGVAKGTTRKAGFETLYLNDAAHEFTLPGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGIAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAESI
YANLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacattcgatccaagtgcatttctcgcgacctgtagcggtcgccctggcgtt
tatcgcatgttcgatgccgacgccacgctgctgtacgtcggcaaggccaagaacctcaag
aaacgtcttgccagctactttcgcaagaccgggcacgcacccaagaccggcgcactggtt
gcgcgcatcgcccagattgaaacgacgatcaccaacaacgaaaccgaagcgctgttgctg
gaacagaccctcatcaaagagtggcggcctccgtacaacatcctgttgcgtgatgataag
tcctacccgtatgtattcctgtccgacggtacctacccacggctgagcattcatcgaggt
gcaaagaaggccaagggtcgatatttcgggccgtatcccagcgccggtgccattcgtgaa
agcctgagcctgctgcaaaagacctttcaggtgcgccagtgcgaagacagctttttcaag
aaccgcaaccggccttgtctgcaatatcagatcaaacgctgcaaggggccgtgcgtcggt
cttgtggagcctgaggtgtacgccgaagacgtgcgtcactcggtgatgtttctcgaaggg
cgcagtaatgcattgagcgatgagctgaacgcctcgatggaaaaagccgcgatggcgctg
gatttcgagcgcgcggccgagttgcgtgatcaggtggcgctgctgcggcgcgttcaggac
cagcaaagcatggacggcggcacaggcgatgtggacgtggttgccgcgttcgtcaatccg
ggcggcgcttgtgtgcacctgatcagcgtgcggggcggccgggtgctgggcagcaagaac
ttcttcccgcaggtcggtatagaagaggaggtcggtgaagtgatgtcggccttcctggcg
cagtattttttgggcggtgttgaccgcgagttgcccagtgaagtcatcgtcaacgtcgtc
aacgaagacttcccggcactgatcgatgccatcgaagaatcgcgtggccgggaaatgacc
atcagccaccgggtgcgcggcactcgggcgcgctggcagcaactggcggtcaccaatgcc
gagcaggcgctggcagcgcggctggccaaccgtcagcacgtcgcgtcgcgatttgaagcg
ttggcagttgtcctcaatctcgacgagccgccgatgcgtctcgaatgctatgacatcagt
cactccagtggtgaggcgaccgtggcgtcgtgtgtcgtgttcgggcctgagggtccgatc
aagtccgattatcgccgcttcaacatcgaaggcgtgaccgccggtgacgactacgccgcc
atgcaccaggccctgacccggcgctacagtcgcatcaaggccggggagggcaagctgccc
gatgtgctgctggtggacggcggcaaggggcaaatgtccatggctcgcgatgtgctcaac
gaattgcaggtgccggacctgatcctgctcggcgttgccaagggcaccacgcgcaaggcc
ggtttcgagacgctgtacctcaatgacgccgctcatgagttcacgctgcctggtgactca
ccggcgctgcaccttattcagcagatacgcgatgaggcgcaccgcttcgcaattaccggc
caccgcgcgcgccgtggcaagacccgacgcacatcgacgctcgaaggtattgcaggcgtc
gggccgacccggcggcgtgatctgctcaaacatttcggtggattacaggagttgtcccgt
gccagcatcgatgaaatagcaaaagcacccggaatcagtaaaaagctggcagagtcgatt
tatgcaaacctgcacagcgagtag
DBGET
integrated database retrieval system
