Pseudomonas syringae pv. tomato DC3000: PSPTO_4501
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Entry
PSPTO_4501 CDS
T00118
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00240
Pyrimidine metabolism
pst00250
Alanine, aspartate and glutamate metabolism
pst01100
Metabolic pathways
pst01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PSPTO_4501 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PSPTO_4501 (carB)
Enzymes [BR:
pst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PSPTO_4501 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAO57949
UniProt:
Q87WP4
LinkDB
All DBs
Position
complement(5068738..5071959)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM
ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM
NPRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLP
RFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLSHPES
MSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIKTLG
LSAIDRDLMYRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFATDT
AYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAAAKIGYPLVVRPSYVLG
GRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIE
VNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVEAVA
RDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatattaaaagcatcctgattctcggcgccggccccatcgtgatc
ggccaggcctgtgaattcgactactccggcgcccaggcttgcaaagccctgcgcgaagag
ggctatcgagttatcctggtgaactccaacccggcgaccatcatgaccgacccggccatg
gccgacgccacctacatcgagccgatcaaatggcagaccgttgccaagatcatcgagaaa
gagcgcccggacgcgttgctgccaaccatgggcggccagaccgcactgaactgcgcactg
gatctggagcgtgaaggcgttctggagaagttcggcgtagagatgatcggtgccaacgcc
gacaccatcgacaaggctgaagaccgttcgcgtttcgacaaggccatgaagtccatcggc
ctggcgtgcccgcgttccggcatcgcgcacagcatggaagaagccaacgcggttcttgaa
aagctcggtttcccttgcatcatccgtccgtcgttcaccatgggtggcacgggcggcggt
attgcttacaatcgtgaagagttcgaagaaatctgcgctcgtggtctggacctgtctccg
accaaggaactgctgatcgacgaatcgctgatcggctggaaagagtacgaaatggaagtt
gtccgcgacaaaaaggacaactgcatcatcgtctgctccatcgaaaacttcgatccgatg
ggtgtgcacaccggtgactccatcaccgttgccccggcacagaccctgaccgacaaggaa
tatcagatcctgcgtaacgcctcgctggcggtactgcgcgagattggcgttgaaacgggt
ggttccaacgttcagttcggcatctgcccggacaccggccgtatggtcgtcatcgagatg
aacccgcgcgtgtcgcgttcctcggcgctggcttccaaggcgaccggcttcccgattgcc
cgggttgcggccaagcttgcagtgggttacaccctcgacgagctgtccaacgaaatcacc
ggcggcaagaccccggcgtccttcgagccatccatcgactacgtcgttaccaagctgccg
cgcttcgcgtttgagaagttcgccaaggccgatgcacgcctgaccacgcagatgaagtcg
gtgggtgaagtcatggccatcggccgtactttccaggaatccctgcagaaagcgctgcgc
ggcctggaagttggtgtgtgtggccttgatccgaagctggacctcagccatccggaaagc
atgagcacgctcaagcgcgagctgaccgtgccgggcgccgagcgtatctggtacgtcgcc
gatgcgttccgcgcaggcatgactgtcgaagaaatcttcgccatgaacatgatcgacccc
tggtttctggtccagatcgaagatctggtcaaggacgaggagaagatcaagacgcttggc
ctgtcggcaattgatcgcgacctgatgtaccgtctcaagcgcaagggcttctccgatgca
cgcctggccaaactggtcggcgttaccgagaaaaacctgcgcacgcaccgtcacaagctg
gatgtgttcccggtctacaagcgcgtcgatacctgcgcggccgagtttgcaaccgacacc
gcgtacctttactcgacgtacgaagaagagtgcgaagccaacccttcgacgcgcgacaag
atcatgatcctcggcggtggccctaaccgtatcggccagggtatcgagttcgactactgc
tgcgtgcacgcagccctggcgctgcgtgaagacgggtacgagaccatcatggtcaactgc
aacccggaaaccgtctccaccgactacgacacctctgatcgtctgtacttcgagccggtc
accctggaagacgtgctggaaatcgtacgcgtcgagaagcccaagggcgtgatcgtgcag
tacggcggccagaccccgctgaaactcgcccgtgccctggaagccgccggcgtcccgatc
atcggcaccagcccggacgccatcgaccgcgcagaagaccgcgagcgcttccagcagatg
gtcgagcgtctcaacctgcgtcagccgccaaacgccaccgtgcgcagcgaagacgaagcg
attcgtgccgccgcgaaaatcggttacccgctggtcgtgcgtccgtcctatgtactgggc
ggccgggcgatggaaatcgtttaccaggaagacgagctcaagcgttacctgcgtgaagcg
gttcaggtgtccaacgacagcccggtgctgctcgaccacttcctgaactgcgccatcgaa
atggacgtcgatgcagtttgcgacggtactgacgtggtgatcggcgcgatcatgcagcac
atcgaacaggcgggcgttcactccggcgactccgcctgctcgctgccgccgtactcgctg
cctgctcacatccaggacgagatgcgcgaacaggtcaagaagatggccctggaactgggc
gtggtgggcctgatgaacgtacagctggcacttcagggcgaagacatctacgtgatcgaa
gtgaacccgcgtgcatcgcgtaccgtgccgttcgtttccaagtgcatcggtgtttccctg
gccatgatcgctgcgcgcgtgatggcgggtaaaaccctgaaagagctgaatttcaccaag
gaaatcattcctaatttctatagtgtgaaagaggccgtgttcccgttcgccaaattccct
ggcgttgacccgatccttggcccggaaatgaagtcgaccggcgaagtgatgggcgtgggc
gacaccttcggtgaagcgttcgccaaggctcagatgggcgccagcgaagtgctgccgacc
ggcggtactgcgtttatcagcgtacgtgatgacgacaagccgctggttgaagcggttgct
cgtgacctgatcaacctgggtttcgaaattgtcgcaacagccggaacggccaagctgatc
gaagcggccggcctgaaagtgcgtcgcgtcaacaaggtgaccgaaggtcgcccgcacgtg
gtcgacatgatcaagaatgacgaagtcaccctgatcatcaacaccaccgaaggccgtcag
tctatcgctgattcctactccatccgtcgcaacgccttgcagcacaagatttactgcacc
actaccattgcagcaggcgaagcgatctgcgaagcgctcaagttcggcccagagaagacc
gtgcgtcgcttgcaggacctccatgcaggattgaaggcatga
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